Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SNORD115-21-201ENST00000362963 81 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-14-201ENST00000363090 81 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-13-201ENST00000363358 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-41-201ENST00000363608 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-11-201ENST00000363616 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-5-201ENST00000363633 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-39-201ENST00000363694 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-4-201ENST00000363810 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-16-201ENST00000363887 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-6-201ENST00000363942 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD46.1-201ENST00000364139 104 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-42-201ENST00000364273 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-15-201ENST00000364809 81 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-1-201ENST00000364961 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-26-201ENST00000365067 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-10-201ENST00000365073 81 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-43-201ENST00000365503 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-36-201ENST00000365629 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 AL139132.1-201ENST00000431587 344 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 HMGN2P3-201ENST00000433603 273 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 HMGN2P5-201ENST00000436882 273 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 PRSS3P4-201ENST00000453323 162 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SCARNA16.3-201ENST00000516595 184 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 RNA5SP137-201ENST00000516833 135 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-40-201ENST00000606510 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 AC095038.3-201ENST00000634439 195 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 AL162726.3-218ENST00000636401 95 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 AC092881.1-201ENST00000638218 2733 ntBASIC2.59□□□□□ -2
SSU72Q9NP77 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SSU72Q9NP77 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.58□□□□□ -2
SSU72Q9NP77 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SSU72Q9NP77 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
SSU72Q9NP77 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.58□□□□□ -2
SSU72Q9NP77 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.58□□□□□ -2
SSU72Q9NP77 RNU11-3P-201ENST00000391111 133 ntBASIC2.58□□□□□ -2
SSU72Q9NP77 POLR2J4-204ENST00000418424 324 ntBASIC2.58□□□□□ -2
SSU72Q9NP77 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.58□□□□□ -2
SSU72Q9NP77 RNU7-6P-201ENST00000516845 62 ntBASIC2.58□□□□□ -2
SSU72Q9NP77 RNU6-56P-201ENST00000516986 93 ntBASIC2.58□□□□□ -2
SSU72Q9NP77 AC090821.2-201ENST00000523552 176 ntBASIC2.58□□□□□ -2
SSU72Q9NP77 AC004812.1-201ENST00000540773 146 ntBASIC2.58□□□□□ -2
SSU72Q9NP77 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSU72Q9NP77 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSU72Q9NP77 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSU72Q9NP77 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSU72Q9NP77 MIR34B-201ENST00000385076 84 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 MTATP8P2-201ENST00000435212 202 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 RNU7-45P-201ENST00000459460 63 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 RNU7-96P-201ENST00000459535 64 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 RNU6-1258P-201ENST00000516911 111 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 RNU6-762P-201ENST00000517107 102 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 MIR4778-201ENST00000577635 80 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 Y_RNA.773-201ENST00000607168 90 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 Y_RNA.818-201ENST00000618813 71 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 AC021613.1-201ENST00000623880 111 ntBASIC2.57□□□□□ -2
SSU72Q9NP77 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SSU72Q9NP77 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.56□□□□□ -2
SSU72Q9NP77 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSU72Q9NP77 MIR422A-201ENST00000362286 90 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 SNORA71.3-201ENST00000362582 128 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 Y_RNA.388-201ENST00000383919 113 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 RNY1P7-201ENST00000384743 110 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 RNU6-1031P-201ENST00000384773 107 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.56□□□□□ -2
SSU72Q9NP77 RPS23P4-201ENST00000487908 423 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 RNA5SP437-201ENST00000517249 129 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 IGLV3-17-201ENST00000519099 244 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 SUB1P4-201ENST00000566062 339 ntBASIC2.56□□□□□ -2
SSU72Q9NP77 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSU72Q9NP77 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSU72Q9NP77 RNA5SP374-201ENST00000362939 125 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 Y_RNA.531-201ENST00000384589 121 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 MIR518A2-201ENST00000384966 87 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 MIR9-1-201ENST00000385198 89 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 RNU6-816P-201ENST00000390914 107 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 RNU6-1268P-201ENST00000391214 107 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 RNU6-1239P-201ENST00000391310 107 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 AL034345.1-201ENST00000407768 123 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 EEF1A1P41-201ENST00000414667 207 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 AC093850.1-201ENST00000454121 251 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 RNU2-11P-201ENST00000459191 187 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 RNA5SP57-201ENST00000459463 123 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 RNU7-12P-201ENST00000516030 62 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 RNU6-158P-201ENST00000517104 100 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 AC141557.1-201ENST00000540982 400 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 MIR3618-201ENST00000580330 88 ntBASIC2.55□□□□□ -2
SSU72Q9NP77 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.55□□□□□ -2
SSU72Q9NP77 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SSU72Q9NP77 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SSU72Q9NP77 RNA5SP456-201ENST00000364002 114 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 259 ms