Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 Y_RNA.336-201ENST00000365307 109 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 Y_RNA.547-201ENST00000384654 119 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 SNORA67.4-201ENST00000384688 142 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 MIRLET7F2-201ENST00000385277 83 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 HMGN2P39-201ENST00000398005 273 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 HSPE1P9-201ENST00000440046 311 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.06□□□□□ -2.08
CPEB3Q8NE35 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.06□□□□□ -2.08
CPEB3Q8NE35 RNVU1-2-201ENST00000516326 135 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 IGKV1-22-201ENST00000524313 326 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 AC103810.6-201ENST00000606708 136 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CPEB3Q8NE35 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CPEB3Q8NE35 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CPEB3Q8NE35 RNU1-51P-201ENST00000365345 176 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CPEB3Q8NE35 RNA5SP465-201ENST00000391195 109 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 AC069257.2-201ENST00000441819 155 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 AL021397.1-201ENST00000451806 248 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 RN7SKP19-201ENST00000516016 252 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 SNORD33.1-201ENST00000516213 88 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 RNU6-1116P-201ENST00000517269 99 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 SNORA28-201ENST00000606769 126 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 AC134878.1-201ENST00000619901 243 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CPEB3Q8NE35 AL391516.1-201ENST00000554380 2449 ntBASIC2.05□□□□□ -2.08
CPEB3Q8NE35 AC005336.3-201ENST00000623833 2679 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 RNA5SP289-201ENST00000362332 137 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 Y_RNA.37-201ENST00000362606 108 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 SNORD115-28-201ENST00000363931 81 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 SNORA4.2-201ENST00000365313 147 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 Y_RNA.410-201ENST00000383992 113 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 RNY4P18-201ENST00000391107 89 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 SNORD23.1-201ENST00000408212 104 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.04□□□□□ -2.08
CPEB3Q8NE35 HMGN2P32-201ENST00000444648 269 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 AC114811.1-201ENST00000507207 168 ntBASIC2.04□□□□□ -2.08
CPEB3Q8NE35 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CPEB3Q8NE35 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
CPEB3Q8NE35 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
CPEB3Q8NE35 RNU6-938P-201ENST00000411285 103 ntBASIC2.03□□□□□ -2.08
CPEB3Q8NE35 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.03□□□□□ -2.08
CPEB3Q8NE35 CYCTP-201ENST00000504253 315 ntBASIC2.03□□□□□ -2.08
CPEB3Q8NE35 MTND5P34-201ENST00000568888 325 ntBASIC2.03□□□□□ -2.08
CPEB3Q8NE35 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CPEB3Q8NE35 ZNF658B-202ENST00000615961 3375 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 RNU6-1189P-201ENST00000383958 107 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 RNU6-163P-201ENST00000384396 106 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CPEB3Q8NE35 AL356379.1-201ENST00000414105 126 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 AL356320.1-201ENST00000429616 163 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 CALM2P4-201ENST00000430810 426 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 AL445646.1-201ENST00000431784 216 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 RNU6-589P-201ENST00000516485 107 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 RNU6-113P-201ENST00000516653 101 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 RNU7-193P-201ENST00000516723 65 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 SNORD36C-201ENST00000516733 66 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 SUB1P4-201ENST00000566062 339 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 MIR5007-201ENST00000583098 95 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 AL590808.1-201ENST00000618696 141 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 AC027279.3-201ENST00000625055 122 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPEB3Q8NE35 AL442644.1-201ENST00000454390 3105 ntBASIC2.02□□□□□ -2.09
CPEB3Q8NE35 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CPEB3Q8NE35 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CPEB3Q8NE35 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CPEB3Q8NE35 RNU6-153P-201ENST00000364422 104 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 RNU6-424P-201ENST00000384367 105 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 U8.16-201ENST00000391279 133 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 RN7SKP200-201ENST00000410564 320 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 RNU4-53P-201ENST00000410828 140 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 RNA5SP501-201ENST00000410990 112 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.01□□□□□ -2.09
CPEB3Q8NE35 Y_RNA.709-201ENST00000516952 92 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 RNA5SP437-201ENST00000517249 129 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.01□□□□□ -2.09
CPEB3Q8NE35 AL670379.3-201ENST00000605040 251 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 AC015726.2-201ENST00000620112 122 ntBASIC2.01□□□□□ -2.09
CPEB3Q8NE35 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CPEB3Q8NE35 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CPEB3Q8NE35 SNORA2.2-201ENST00000365473 135 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 Y_RNA.440-201ENST00000384120 114 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 RNU6-301P-201ENST00000384277 107 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 RN7SKP192-201ENST00000411291 327 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 RNA5SP281-201ENST00000516504 135 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 MIR4298-201ENST00000584380 73 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2□□□□□ -2.09
CPEB3Q8NE35 AC025166.1-201ENST00000612411 163 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
CPEB3Q8NE35 ICE2P2-201ENST00000483823 2787 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 RNU6-112P-201ENST00000363599 104 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 Y_RNA.346-201ENST00000365385 112 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 Y_RNA.366-201ENST00000365540 102 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 RNU6-296P-201ENST00000384608 107 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 RNU6-950P-201ENST00000384651 107 ntBASIC1.99□□□□□ -2.09
CPEB3Q8NE35 RNU6-1031P-201ENST00000384773 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms