Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC004965.1-201ENST00000413033 213 ntBASIC2.21□□□□□ -2.06
SYNPOQ8N3V7 AL445646.1-201ENST00000431784 216 ntBASIC2.21□□□□□ -2.06
SYNPOQ8N3V7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.21□□□□□ -2.06
SYNPOQ8N3V7 MIR4662B-201ENST00000579498 81 ntBASIC2.21□□□□□ -2.06
SYNPOQ8N3V7 AC027279.3-201ENST00000625055 122 ntBASIC2.21□□□□□ -2.06
SYNPOQ8N3V7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SYNPOQ8N3V7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SYNPOQ8N3V7 RNU6-1123P-201ENST00000362347 106 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 RNU6-151P-201ENST00000364158 107 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 SNORA67.3-201ENST00000384366 140 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.486-201ENST00000384398 107 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.488-201ENST00000384403 102 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 MIR513A1-201ENST00000385138 129 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 MIR516B2-201ENST00000385190 85 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 MIR569-201ENST00000385228 96 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 AC107027.2-201ENST00000512197 115 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 SNORA44.1-201ENST00000517031 108 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 AL359851.1-201ENST00000569460 4997 ntBASIC2.2□□□□□ -2.06
SYNPOQ8N3V7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 AC005336.3-201ENST00000623833 2679 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 RNU6-833P-201ENST00000363486 107 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.291-201ENST00000364886 113 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.336-201ENST00000365307 109 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 RNU6-1138P-201ENST00000365359 106 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 SNORA26-201ENST00000391286 122 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 snoU13.9-201ENST00000458927 103 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 RNU6-365P-201ENST00000517113 106 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 AC103810.8-201ENST00000607347 118 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 AC015726.2-201ENST00000620112 122 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 MIR3658-201ENST00000636291 56 ntBASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.91-201ENST00000363042 107 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.343-201ENST00000365354 112 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 SNORD38C-201ENST00000384381 69 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.497-201ENST00000384447 98 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 AC019129.1-201ENST00000403786 261 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 RNU2-55P-201ENST00000411146 174 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 AC005908.1-201ENST00000468701 347 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.666-201ENST00000516187 112 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 RNU6-426P-201ENST00000516464 97 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SYNPOQ8N3V7 RNU6-643P-201ENST00000384018 107 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 MIR30A-201ENST00000385092 71 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 AL023284.1-201ENST00000403956 276 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 RNA5SP489-201ENST00000410986 109 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 HSPE1P24-201ENST00000450782 238 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 RNA5SP182-201ENST00000516064 82 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 RNU6-126P-201ENST00000516685 103 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 RNU6-1270P-201ENST00000517128 108 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 DNAJC19P2-201ENST00000593340 302 ntBASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SYNPOQ8N3V7 RNU6-199P-201ENST00000362954 107 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 RNU6-457P-201ENST00000363999 107 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.634-201ENST00000364811 113 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 RNU4-11P-201ENST00000365287 132 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 RNU6-484P-201ENST00000384016 107 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.521-201ENST00000384560 114 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 MIR452-201ENST00000385020 85 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 Y_RNA.586-201ENST00000391146 98 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 RNU4-43P-201ENST00000410628 137 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 RNA5SP272-201ENST00000516095 111 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 RNU6-197P-201ENST00000516680 100 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 MIR548X2-201ENST00000579776 100 ntBASIC2.16□□□□□ -2.06
SYNPOQ8N3V7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SYNPOQ8N3V7 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
SYNPOQ8N3V7 RNU6-268P-201ENST00000364174 107 ntBASIC2.15□□□□□ -2.07
SYNPOQ8N3V7 RNU6-257P-201ENST00000410238 98 ntBASIC2.15□□□□□ -2.07
SYNPOQ8N3V7 AC015922.2-201ENST00000435593 184 ntBASIC2.15□□□□□ -2.07
SYNPOQ8N3V7 RNU6-693P-201ENST00000516134 107 ntBASIC2.15□□□□□ -2.07
SYNPOQ8N3V7 FAM106DP-201ENST00000586416 501 ntBASIC2.15□□□□□ -2.07
SYNPOQ8N3V7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SYNPOQ8N3V7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SYNPOQ8N3V7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SYNPOQ8N3V7 Y_RNA.337-201ENST00000365312 102 ntBASIC2.14□□□□□ -2.07
SYNPOQ8N3V7 MIR194-1-201ENST00000384892 85 ntBASIC2.14□□□□□ -2.07
SYNPOQ8N3V7 MIR548O-201ENST00000408583 114 ntBASIC2.14□□□□□ -2.07
SYNPOQ8N3V7 SNRPGP13-201ENST00000442212 177 ntBASIC2.14□□□□□ -2.07
SYNPOQ8N3V7 RNU6-504P-201ENST00000516568 104 ntBASIC2.14□□□□□ -2.07
SYNPOQ8N3V7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SYNPOQ8N3V7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 RNU6-959P-201ENST00000384671 107 ntBASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 RNU7-197P-201ENST00000458836 62 ntBASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 SNORA25.12-201ENST00000516202 82 ntBASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 RNA5SP153-201ENST00000516498 76 ntBASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 AC019176.1-201ENST00000518519 225 ntBASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 SNORA77B-201ENST00000578179 125 ntBASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 AL096840.1-201ENST00000603287 93 ntBASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 AP000942.3-201ENST00000603702 160 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms