Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MTND5P34-201ENST00000568888 325 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 SNORA4-201ENST00000584302 138 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 AC131055.1-201ENST00000584626 316 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 AC084768.2-201ENST00000622736 221 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 MIR338-201ENST00000636369 67 ntBASIC2.33□□□□□ -2.04
SYNE4Q8N205 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SYNE4Q8N205 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SYNE4Q8N205 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.32□□□□□ -2.04
SYNE4Q8N205 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SYNE4Q8N205 WWP1P1-201ENST00000466609 2769 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SYNE4Q8N205 Y_RNA.120-201ENST00000363304 110 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 RNU6-1138P-201ENST00000365359 106 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 AC233266.1-201ENST00000454518 96 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 OR9P1P-201ENST00000496431 281 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 PDCD5P2-201ENST00000507570 312 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 RNU5E-3P-201ENST00000515913 68 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 Y_RNA.690-201ENST00000516603 95 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 IGKV1-22-201ENST00000524313 326 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 AC242852.1-201ENST00000612151 96 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 AC244015.1-201ENST00000622301 99 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 MIR376A2-201ENST00000636782 80 ntBASIC2.32□□□□□ -2.04
SYNE4Q8N205 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SYNE4Q8N205 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SYNE4Q8N205 RNU6-834P-201ENST00000362367 110 ntBASIC2.31□□□□□ -2.04
SYNE4Q8N205 SNORD115-3-201ENST00000363100 82 ntBASIC2.31□□□□□ -2.04
SYNE4Q8N205 MIR548A2-201ENST00000384956 97 ntBASIC2.31□□□□□ -2.04
SYNE4Q8N205 MIR3129-201ENST00000581095 76 ntBASIC2.31□□□□□ -2.04
SYNE4Q8N205 MIR4303-201ENST00000581299 66 ntBASIC2.31□□□□□ -2.04
SYNE4Q8N205 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
SYNE4Q8N205 SNORD14A-201ENST00000606526 91 ntBASIC2.31□□□□□ -2.04
SYNE4Q8N205 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SYNE4Q8N205 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SYNE4Q8N205 Y_RNA.267-201ENST00000364679 109 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 SNORD61-201ENST00000384252 73 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 RNU6-160P-201ENST00000384591 107 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 SNRPGP10-201ENST00000432323 225 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 RN7SKP179-201ENST00000516126 217 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 RNU6-589P-201ENST00000516485 107 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 RNU6-1061P-201ENST00000516530 99 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 Y_RNA.692-201ENST00000516627 105 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 RNU6-250P-201ENST00000516958 103 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 RNU6-1270P-201ENST00000517128 108 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 MIR3126-201ENST00000577443 74 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 AC026271.5-201ENST00000577873 130 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 MIR2681-201ENST00000581814 105 ntBASIC2.3□□□□□ -2.04
SYNE4Q8N205 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SYNE4Q8N205 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SYNE4Q8N205 SNORD58C-201ENST00000365223 64 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 MIR891A-201ENST00000401237 79 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 Y_RNA.617-201ENST00000410920 90 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 AL606517.2-201ENST00000442855 241 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 RNU1-131P-201ENST00000458943 161 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 AC025033.1-201ENST00000463883 194 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 HMGN1P7-201ENST00000491722 313 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 Y_RNA.666-201ENST00000516187 112 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 RNU7-99P-201ENST00000516271 62 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 Y_RNA.709-201ENST00000516952 92 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.29□□□□□ -2.04
SYNE4Q8N205 Y_RNA.757-201ENST00000578934 114 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 AC007229.1-201ENST00000590455 412 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 AL365205.2-201ENST00000594586 68 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 JPX_2.1-201ENST00000614161 69 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 AL591926.4-201ENST00000616895 298 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 AC022513.1-201ENST00000624512 117 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 MIR6079-201ENST00000635807 62 ntBASIC2.29□□□□□ -2.04
SYNE4Q8N205 RNU6-1298P-201ENST00000362456 101 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 SNORA1B-201ENST00000362535 133 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 RNA5SP493-201ENST00000364115 91 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 MIR520G-201ENST00000385064 90 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 AL603914.1-201ENST00000401964 204 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.28□□□□□ -2.04
SYNE4Q8N205 RPS26P45-201ENST00000471748 340 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 RNA5SP236-201ENST00000516169 116 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 SNORA31.11-201ENST00000516528 139 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 RNA5SP137-201ENST00000516833 135 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 AC133485.4-201ENST00000561835 220 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 AC138907.4-201ENST00000570107 226 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 MIR3169-201ENST00000578032 83 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 AC008507.4-201ENST00000585464 127 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 AL022345.2-201ENST00000606307 135 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.28□□□□□ -2.04
SYNE4Q8N205 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SYNE4Q8N205 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SYNE4Q8N205 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
SYNE4Q8N205 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
SYNE4Q8N205 MIR624-201ENST00000385217 97 ntBASIC2.27□□□□□ -2.05
SYNE4Q8N205 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SYNE4Q8N205 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.27□□□□□ -2.05
SYNE4Q8N205 BX510359.4-201ENST00000423750 193 ntBASIC2.27□□□□□ -2.05
SYNE4Q8N205 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.27□□□□□ -2.05
SYNE4Q8N205 AC099677.2-201ENST00000436385 175 ntBASIC2.27□□□□□ -2.05
SYNE4Q8N205 AL353689.1-201ENST00000438895 199 ntBASIC2.27□□□□□ -2.05
SYNE4Q8N205 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
SYNE4Q8N205 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SYNE4Q8N205 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SYNE4Q8N205 AC018630.2-201ENST00000534866 2403 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms