Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MIR3198-2-201ENST00000577868 80 ntBASIC1.32□□□□□ -2.2
LRRTM1Q86UE6 MIR502-201ENST00000606349 86 ntBASIC1.32□□□□□ -2.2
LRRTM1Q86UE6 AL391903.3-201ENST00000612158 163 ntBASIC1.32□□□□□ -2.2
LRRTM1Q86UE6 JPX_2.1-201ENST00000614161 69 ntBASIC1.32□□□□□ -2.2
LRRTM1Q86UE6 AP000648.3-201ENST00000623539 4507 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 Y_RNA.23-201ENST00000362496 106 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU6-103P-201ENST00000363686 107 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU4-84P-201ENST00000364200 139 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU6-312P-201ENST00000364629 107 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 SNORD116-18-201ENST00000383961 92 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU6-484P-201ENST00000384016 107 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 Y_RNA.486-201ENST00000384398 107 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU6-950P-201ENST00000384651 107 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU6-131P-201ENST00000391144 107 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 MIR1289-2-201ENST00000408360 111 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 JTBP1-201ENST00000441314 247 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU6-970P-201ENST00000516312 107 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU7-149P-201ENST00000516739 59 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 RNU6-1212P-201ENST00000517023 104 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 MIR4285-201ENST00000581001 85 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 AC008507.4-201ENST00000585464 127 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 AC120024.3-201ENST00000603167 156 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 SNORA28-201ENST00000606769 126 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 uc_338.4-201ENST00000616635 176 ntBASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
LRRTM1Q86UE6 MIR660-201ENST00000385235 97 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 RNA5SP496-201ENST00000391240 109 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 AL627390.1-201ENST00000396055 340 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 MIR1267-201ENST00000408723 78 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 AC004965.1-201ENST00000413033 213 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 SNRPGP14-201ENST00000435400 219 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 RNU7-200P-201ENST00000516105 62 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 SUMO2P16-201ENST00000519475 264 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 MIR4431-201ENST00000579990 94 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 MIR2681-201ENST00000581814 105 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 BX248123.2-201ENST00000606318 124 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 Pinc.1-201ENST00000616452 154 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 AC106754.2-201ENST00000623006 233 ntBASIC1.3□□□□□ -2.2
LRRTM1Q86UE6 RNU6-457P-201ENST00000363999 107 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 RNU1-42P-201ENST00000364033 160 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 RNU6-163P-201ENST00000384396 106 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 RNU6-768P-201ENST00000384683 107 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 MIR526A1-201ENST00000384897 85 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 MIR504-201ENST00000385065 83 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 U8.13-201ENST00000390842 128 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 MIR934-201ENST00000401241 83 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 AL603908.1-201ENST00000406098 201 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 HSPE1P24-201ENST00000450782 238 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 snoU13.9-201ENST00000458927 103 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 RNU7-12P-201ENST00000516030 62 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 SNORD77.4-201ENST00000516158 81 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 SNORD116-25-201ENST00000516517 92 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 RNU6-548P-201ENST00000517083 115 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 MIR5688-201ENST00000580619 83 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 AL513423.1-201ENST00000621695 132 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 SNORD3E-202ENST00000627253 216 ntBASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.29□□□□□ -2.2
LRRTM1Q86UE6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 RNU6-151P-201ENST00000364158 107 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 RNU6-728P-201ENST00000365375 104 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 RNU6-643P-201ENST00000384018 107 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 SNORA20-201ENST00000384662 132 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 MIR1323-201ENST00000408090 73 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 MIR548M-201ENST00000408260 86 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 CYCTP-201ENST00000504253 315 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 SNORA25.15-201ENST00000516487 89 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 RNU7-121P-201ENST00000516604 62 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 MIR6845-201ENST00000613182 61 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
LRRTM1Q86UE6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 MIR302D-201ENST00000362275 68 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 RNU6-1082P-201ENST00000364574 107 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 Y_RNA.634-201ENST00000364811 113 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 Y_RNA.357-201ENST00000365487 109 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 RNU6-239P-201ENST00000390990 99 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 RNU6-588P-201ENST00000410281 105 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 RNU6-917P-201ENST00000516294 104 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 AC104984.5-201ENST00000586878 94 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 MIR6715A-201ENST00000615929 79 ntBASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LRRTM1Q86UE6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms