Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC015922.2-201ENST00000435593 184 ntBASIC1.86□□□□□ -2.11
NKX6-1P78426 RNU6-717P-201ENST00000459076 104 ntBASIC1.86□□□□□ -2.11
NKX6-1P78426 AC107027.2-201ENST00000512197 115 ntBASIC1.86□□□□□ -2.11
NKX6-1P78426 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
NKX6-1P78426 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
NKX6-1P78426 AL359851.1-201ENST00000569460 4997 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 Y_RNA.118-201ENST00000363300 101 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 RNU6-886P-201ENST00000384319 105 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 MIR136-201ENST00000385207 82 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 U8.13-201ENST00000390842 128 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 AC006461.1-201ENST00000412637 326 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 SEPT7P4-201ENST00000437076 306 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 SNRPGP13-201ENST00000442212 177 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
NKX6-1P78426 WWP1P1-201ENST00000466609 2769 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 AC019129.1-201ENST00000403786 261 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 MIR1287-201ENST00000408492 90 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 HSPE1P24-201ENST00000450782 238 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 RNU6-1053P-201ENST00000515930 101 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 RNU6-322P-201ENST00000516010 103 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 SNORD116-25-201ENST00000516517 92 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 MIR378D2-201ENST00000580636 98 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 AC097639.2-201ENST00000603159 172 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 AC106754.2-201ENST00000623006 233 ntBASIC1.84□□□□□ -2.11
NKX6-1P78426 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.84□□□□□ -2.11
NKX6-1P78426 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NKX6-1P78426 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
NKX6-1P78426 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.83□□□□□ -2.12
NKX6-1P78426 SNORD33-201ENST00000362761 85 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 RNU1-17P-201ENST00000363022 152 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 Y_RNA.91-201ENST00000363042 107 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 RNU6-457P-201ENST00000363999 107 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 SNORA2.2-201ENST00000365473 135 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 SNORD24-201ENST00000383884 75 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 SNRPGP14-201ENST00000435400 219 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 RNU6-693P-201ENST00000516134 107 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 Y_RNA.666-201ENST00000516187 112 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 RNU1-40P-201ENST00000516816 164 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 RNU1-97P-201ENST00000516872 164 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 AC015688.6-201ENST00000577737 104 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.83□□□□□ -2.12
NKX6-1P78426 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
NKX6-1P78426 Y_RNA.337-201ENST00000365312 102 ntBASIC1.82□□□□□ -2.12
NKX6-1P78426 Y_RNA.521-201ENST00000384560 114 ntBASIC1.82□□□□□ -2.12
NKX6-1P78426 MIR583-201ENST00000384846 75 ntBASIC1.82□□□□□ -2.12
NKX6-1P78426 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NKX6-1P78426 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.82□□□□□ -2.12
NKX6-1P78426 MIR548O-201ENST00000408583 114 ntBASIC1.82□□□□□ -2.12
NKX6-1P78426 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
NKX6-1P78426 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX6-1P78426 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.82□□□□□ -2.12
NKX6-1P78426 AC015726.2-201ENST00000620112 122 ntBASIC1.82□□□□□ -2.12
NKX6-1P78426 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX6-1P78426 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NKX6-1P78426 Y_RNA.180-201ENST00000363867 113 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 RNU4-84P-201ENST00000364200 139 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 Y_RNA.441-201ENST00000384123 112 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 MIR516B2-201ENST00000385190 85 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 RNU6-239P-201ENST00000390990 99 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 AL445646.1-201ENST00000431784 216 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 AC074198.2-201ENST00000508153 258 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
NKX6-1P78426 AC090142.3-201ENST00000519012 385 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 MIR4498-201ENST00000577599 66 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 FAM106DP-201ENST00000586416 501 ntBASIC1.81□□□□□ -2.12
NKX6-1P78426 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX6-1P78426 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
NKX6-1P78426 RNU6-888P-201ENST00000363010 101 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 RNU6-209P-201ENST00000384118 107 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 RNA5SP338-201ENST00000410495 85 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 RNU6-1135P-201ENST00000411083 103 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 AC079140.2-201ENST00000506193 142 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 RNU6-830P-201ENST00000516353 107 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 MIR5002-201ENST00000584713 97 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 MIR6845-201ENST00000613182 61 ntBASIC1.8□□□□□ -2.12
NKX6-1P78426 Y_RNA.66-201ENST00000362862 102 ntBASIC1.79□□□□□ -2.12
NKX6-1P78426 SNORD61-201ENST00000384252 73 ntBASIC1.79□□□□□ -2.12
NKX6-1P78426 MT-TR-201ENST00000387439 65 ntBASIC1.79□□□□□ -2.12
NKX6-1P78426 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NKX6-1P78426 AL451046.2-201ENST00000403074 277 ntBASIC1.79□□□□□ -2.12
NKX6-1P78426 RNU7-25P-201ENST00000516544 62 ntBASIC1.79□□□□□ -2.12
NKX6-1P78426 RNU6-1270P-201ENST00000517128 108 ntBASIC1.79□□□□□ -2.12
NKX6-1P78426 AC090049.2-201ENST00000550377 109 ntBASIC1.79□□□□□ -2.12
NKX6-1P78426 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.79□□□□□ -2.12
NKX6-1P78426 ZNF355P-201ENST00000427301 3216 ntBASIC1.79□□□□□ -2.12
NKX6-1P78426 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NKX6-1P78426 SNORD115-28-201ENST00000363931 81 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 SNORA25.7-201ENST00000364375 127 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 Y_RNA.272-201ENST00000364696 102 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 SNORD1A-201ENST00000364968 72 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 Y_RNA.547-201ENST00000384654 119 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 MIR526A1-201ENST00000384897 85 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 PCNPP3-201ENST00000393579 471 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 RNU5E-9P-201ENST00000411164 104 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 CYCSP49-201ENST00000420810 319 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 SNX2P2-201ENST00000424553 323 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 AC025033.1-201ENST00000463883 194 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms