Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 Y_RNA.298-201ENST00000364960 107 ntBASIC2.51□□□□□ -2.01
YBX1P67809 Y_RNA.351-201ENST00000365436 96 ntBASIC2.51□□□□□ -2.01
YBX1P67809 Y_RNA.440-201ENST00000384120 114 ntBASIC2.51□□□□□ -2.01
YBX1P67809 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
YBX1P67809 RNA5SP482-201ENST00000391269 118 ntBASIC2.51□□□□□ -2.01
YBX1P67809 SNRPGP14-201ENST00000435400 219 ntBASIC2.51□□□□□ -2.01
YBX1P67809 AC099677.2-201ENST00000436385 175 ntBASIC2.51□□□□□ -2.01
YBX1P67809 AC009238.1-201ENST00000442165 424 ntBASIC2.51□□□□□ -2.01
YBX1P67809 AC009237.6-201ENST00000446969 424 ntBASIC2.51□□□□□ -2.01
YBX1P67809 AC068339.1-201ENST00000526965 141 ntBASIC2.51□□□□□ -2.01
YBX1P67809 AP003484.1-201ENST00000530974 250 ntBASIC2.51□□□□□ -2.01
YBX1P67809 MIR5009-201ENST00000578736 100 ntBASIC2.51□□□□□ -2.01
YBX1P67809 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
YBX1P67809 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
YBX1P67809 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
YBX1P67809 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
YBX1P67809 Y_RNA.336-201ENST00000365307 109 ntBASIC2.5□□□□□ -2.01
YBX1P67809 MIR196B-201ENST00000384852 84 ntBASIC2.5□□□□□ -2.01
YBX1P67809 MT-TI-201ENST00000387365 69 ntBASIC2.5□□□□□ -2.01
YBX1P67809 RNU6-938P-201ENST00000411285 103 ntBASIC2.5□□□□□ -2.01
YBX1P67809 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.5□□□□□ -2.01
YBX1P67809 AC245047.3-201ENST00000429428 127 ntBASIC2.5□□□□□ -2.01
YBX1P67809 RNU6-109P-201ENST00000516364 107 ntBASIC2.5□□□□□ -2.01
YBX1P67809 RNU6-184P-201ENST00000516514 107 ntBASIC2.5□□□□□ -2.01
YBX1P67809 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.5□□□□□ -2.01
YBX1P67809 AL596211.1-201ENST00000569873 2277 ntBASIC2.5□□□□□ -2.01
YBX1P67809 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.5□□□□□ -2.01
YBX1P67809 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.5□□□□□ -2.01
YBX1P67809 RNU1-109P-201ENST00000383960 147 ntBASIC2.49□□□□□ -2.01
YBX1P67809 RNU6-49P-201ENST00000384256 107 ntBASIC2.49□□□□□ -2.01
YBX1P67809 MIR590-201ENST00000385008 97 ntBASIC2.49□□□□□ -2.01
YBX1P67809 AL513328.1-201ENST00000446460 224 ntBASIC2.49□□□□□ -2.01
YBX1P67809 snoU13.15-201ENST00000459407 104 ntBASIC2.49□□□□□ -2.01
YBX1P67809 RNU7-80P-201ENST00000459562 61 ntBASIC2.49□□□□□ -2.01
YBX1P67809 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
YBX1P67809 AC010297.1-201ENST00000623948 149 ntBASIC2.49□□□□□ -2.01
YBX1P67809 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
YBX1P67809 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.48□□□□□ -2.01
YBX1P67809 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
YBX1P67809 MIR342-201ENST00000362212 99 ntBASIC2.48□□□□□ -2.01
YBX1P67809 RNU6-23P-201ENST00000363283 107 ntBASIC2.48□□□□□ -2.01
YBX1P67809 Y_RNA.344-201ENST00000365381 112 ntBASIC2.48□□□□□ -2.01
YBX1P67809 RNU6-1104P-201ENST00000384723 104 ntBASIC2.48□□□□□ -2.01
YBX1P67809 RNA5SP109-201ENST00000391010 116 ntBASIC2.48□□□□□ -2.01
YBX1P67809 SNORA19.1-201ENST00000410656 129 ntBASIC2.48□□□□□ -2.01
YBX1P67809 AL606517.2-201ENST00000442855 241 ntBASIC2.48□□□□□ -2.01
YBX1P67809 snoU13.23-201ENST00000458863 104 ntBASIC2.48□□□□□ -2.01
YBX1P67809 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
YBX1P67809 RNU7-123P-201ENST00000515911 60 ntBASIC2.48□□□□□ -2.01
YBX1P67809 RNA5SP24-201ENST00000516478 95 ntBASIC2.48□□□□□ -2.01
YBX1P67809 RNU7-28P-201ENST00000516759 62 ntBASIC2.48□□□□□ -2.01
YBX1P67809 RNU6-844P-201ENST00000517175 102 ntBASIC2.48□□□□□ -2.01
YBX1P67809 AC141557.1-201ENST00000540982 400 ntBASIC2.48□□□□□ -2.01
YBX1P67809 MIR4778-201ENST00000577635 80 ntBASIC2.48□□□□□ -2.01
YBX1P67809 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
YBX1P67809 MIR4305-201ENST00000583252 102 ntBASIC2.48□□□□□ -2.01
YBX1P67809 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
YBX1P67809 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
YBX1P67809 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
YBX1P67809 AC064859.1-201ENST00000624741 174 ntBASIC2.48□□□□□ -2.01
YBX1P67809 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
YBX1P67809 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
YBX1P67809 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
YBX1P67809 SNORD115-3-201ENST00000363100 82 ntBASIC2.47□□□□□ -2.01
YBX1P67809 RNA5SP68-201ENST00000363885 119 ntBASIC2.47□□□□□ -2.01
YBX1P67809 Y_RNA.454-201ENST00000384224 113 ntBASIC2.47□□□□□ -2.01
YBX1P67809 MIR548D2-201ENST00000384955 97 ntBASIC2.47□□□□□ -2.01
YBX1P67809 SNORA26.2-201ENST00000390922 122 ntBASIC2.47□□□□□ -2.01
YBX1P67809 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.47□□□□□ -2.01
YBX1P67809 SNX2P2-201ENST00000424553 323 ntBASIC2.47□□□□□ -2.01
YBX1P67809 AC087499.4-201ENST00000448505 178 ntBASIC2.47□□□□□ -2.01
YBX1P67809 AC008413.1-201ENST00000511864 177 ntBASIC2.47□□□□□ -2.01
YBX1P67809 AC084364.2-201ENST00000546924 395 ntBASIC2.47□□□□□ -2.01
YBX1P67809 AC022523.2-201ENST00000561045 150 ntBASIC2.47□□□□□ -2.01
YBX1P67809 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
YBX1P67809 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
YBX1P67809 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
YBX1P67809 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
YBX1P67809 SNORD38C-201ENST00000384381 69 ntBASIC2.46□□□□□ -2.02
YBX1P67809 Y_RNA.558-201ENST00000384685 113 ntBASIC2.46□□□□□ -2.02
YBX1P67809 STAG3L5P-204ENST00000443759 179 ntBASIC2.46□□□□□ -2.02
YBX1P67809 AC114811.1-201ENST00000507207 168 ntBASIC2.46□□□□□ -2.02
YBX1P67809 RNA5SP320-201ENST00000516263 124 ntBASIC2.46□□□□□ -2.02
YBX1P67809 RNA5SP148-201ENST00000516527 94 ntBASIC2.46□□□□□ -2.02
YBX1P67809 DEFB122-202ENST00000569013 197 ntBASIC2.46□□□□□ -2.02
YBX1P67809 MIR3163-201ENST00000581592 73 ntBASIC2.46□□□□□ -2.02
YBX1P67809 AC002984.1-201ENST00000591692 448 ntBASIC2.46□□□□□ -2.02
YBX1P67809 HSPE1P19-201ENST00000603327 295 ntBASIC2.46□□□□□ -2.02
YBX1P67809 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.46□□□□□ -2.02
YBX1P67809 AC091932.4-201ENST00000623386 200 ntBASIC2.46□□□□□ -2.02
YBX1P67809 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.46□□□□□ -2.02
YBX1P67809 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
YBX1P67809 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.46□□□□□ -2.02
YBX1P67809 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
YBX1P67809 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
YBX1P67809 U8.2-201ENST00000363156 134 ntBASIC2.45□□□□□ -2.02
YBX1P67809 RNU4-16P-201ENST00000364737 141 ntBASIC2.45□□□□□ -2.02
YBX1P67809 MIR488-201ENST00000365739 83 ntBASIC2.45□□□□□ -2.02
YBX1P67809 RNU6-163P-201ENST00000384396 106 ntBASIC2.45□□□□□ -2.02
YBX1P67809 SNORA11.4-201ENST00000408823 129 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms