Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC069257.2-201ENST00000441819 155 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 HMGN2P32-201ENST00000444648 269 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC6A11P48066 AC114811.1-201ENST00000507207 168 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 AC025166.1-201ENST00000612411 163 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 RNU6-153P-201ENST00000364422 104 ntBASIC2.38□□□□□ -2.03
SLC6A11P48066 SNORA2.2-201ENST00000365473 135 ntBASIC2.38□□□□□ -2.03
SLC6A11P48066 RNY4P18-201ENST00000391107 89 ntBASIC2.38□□□□□ -2.03
SLC6A11P48066 SNRPGP14-201ENST00000435400 219 ntBASIC2.38□□□□□ -2.03
SLC6A11P48066 SNORA31.10-201ENST00000516482 106 ntBASIC2.38□□□□□ -2.03
SLC6A11P48066 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
SLC6A11P48066 MIR1273D-201ENST00000577266 86 ntBASIC2.38□□□□□ -2.03
SLC6A11P48066 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.38□□□□□ -2.03
SLC6A11P48066 MIR21-201ENST00000362134 72 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 Y_RNA.410-201ENST00000383992 113 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 MIR518A2-201ENST00000384966 87 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 MIR1283-2-201ENST00000408621 87 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 RN7SKP200-201ENST00000410564 320 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 RNU2-7P-201ENST00000410794 178 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SLC6A11P48066 CYCTP-201ENST00000504253 315 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 SNORD36C-201ENST00000516733 66 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 SCARNA15-202ENST00000516881 127 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 RNU7-70P-201ENST00000516941 66 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 Y_RNA.709-201ENST00000516952 92 ntBASIC2.37□□□□□ -2.03
SLC6A11P48066 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC6A11P48066 Y_RNA.37-201ENST00000362606 108 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 SNORA4.2-201ENST00000365313 147 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 Y_RNA.346-201ENST00000365385 112 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 SNORD38C-201ENST00000384381 69 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 SNORD116-21-201ENST00000384507 92 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 snoU13.23-201ENST00000458863 104 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 PDCD5P2-201ENST00000507570 312 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 RNVU1-2-201ENST00000516326 135 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 IGKV1-22-201ENST00000524313 326 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 DEFB122-202ENST00000569013 197 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 AC067747.1-201ENST00000608026 250 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 MIR6873-201ENST00000622788 63 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 AC010297.1-201ENST00000623948 149 ntBASIC2.36□□□□□ -2.03
SLC6A11P48066 Y_RNA.366-201ENST00000365540 102 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 SNORA22-201ENST00000383907 134 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 RNU1-52P-201ENST00000384190 164 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 MIR548A1-201ENST00000385041 97 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SLC6A11P48066 RNA5SP465-201ENST00000391195 109 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 AL034345.1-201ENST00000407768 123 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 MIR1289-2-201ENST00000408360 111 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 CALM2P4-201ENST00000430810 426 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 Y_RNA.649-201ENST00000459077 103 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 SNORA18.7-201ENST00000516910 131 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 SNORD14A-201ENST00000606526 91 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SLC6A11P48066 MTND5P18-201ENST00000445624 1801 ntBASIC2.35□□□□□ -2.03
SLC6A11P48066 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SLC6A11P48066 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
SLC6A11P48066 HMGN2P39-201ENST00000398005 273 ntBASIC2.34□□□□□ -2.03
SLC6A11P48066 RNU7-34P-201ENST00000459394 64 ntBASIC2.34□□□□□ -2.03
SLC6A11P48066 RNU6-240P-201ENST00000516098 97 ntBASIC2.34□□□□□ -2.03
SLC6A11P48066 RNU6-589P-201ENST00000516485 107 ntBASIC2.34□□□□□ -2.03
SLC6A11P48066 AP003484.1-201ENST00000530974 250 ntBASIC2.34□□□□□ -2.03
SLC6A11P48066 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.34□□□□□ -2.03
SLC6A11P48066 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.34□□□□□ -2.03
SLC6A11P48066 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
SLC6A11P48066 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
SLC6A11P48066 Y_RNA.35-201ENST00000362601 101 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 Y_RNA.528-201ENST00000384575 108 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 RNU6-950P-201ENST00000384651 107 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 U8.16-201ENST00000391279 133 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC6A11P48066 AC108210.2-201ENST00000503681 201 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 RNU6-113P-201ENST00000516653 101 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 AL137067.1-201ENST00000615933 120 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 FO624990.1-201ENST00000636373 85 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 AC007336.1-201ENST00000576365 3828 ntBASIC2.33□□□□□ -2.04
SLC6A11P48066 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 MIRLET7C-201ENST00000362160 84 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 MIR342-201ENST00000362212 99 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 RNA5SP393-201ENST00000363423 117 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 SNORA67.1-201ENST00000364749 141 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 RNU6-690P-201ENST00000365242 106 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 SNORA67.3-201ENST00000384366 140 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 SNORA64-201ENST00000384674 134 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 MIRLET7F2-201ENST00000385277 83 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC6A11P48066 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
SLC6A11P48066 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC6A11P48066 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC6A11P48066 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC6A11P48066 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SLC6A11P48066 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SLC6A11P48066 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SLC6A11P48066 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
SLC6A11P48066 SNORA63D-201ENST00000364359 132 ntBASIC2.31□□□□□ -2.04
SLC6A11P48066 RNU1-133P-201ENST00000364867 167 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 238.4 ms