Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNY1P11-201ENST00000363759 113 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 SNORD115-30-201ENST00000364117 82 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 RNU6-1264P-201ENST00000383891 107 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 SNORA72.4-201ENST00000384174 132 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 RNU6-439P-201ENST00000384188 106 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 SNORA67.2-201ENST00000384300 149 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC13P31276 AL117342.1-201ENST00000404861 406 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 MIR1253-201ENST00000408273 105 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 RNU6-855P-201ENST00000410395 104 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 AC010154.1-201ENST00000425857 269 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 HSPE1P9-201ENST00000440046 311 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 RNU7-197P-201ENST00000458836 62 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 RNU7-107P-201ENST00000459121 61 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.72□□□□□ -2.13
HOXC13P31276 SNORD11B-201ENST00000607707 90 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 Y_RNA.802-201ENST00000614892 130 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 AL078604.3-201ENST00000615580 211 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 TUG1_4.1-201ENST00000619464 181 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 MIR338-201ENST00000636369 67 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 AC068205.3-201ENST00000636385 468 ntBASIC1.72□□□□□ -2.13
HOXC13P31276 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HOXC13P31276 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
HOXC13P31276 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HOXC13P31276 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HOXC13P31276 Y_RNA.341-201ENST00000365341 102 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 RNU6-1056P-201ENST00000383996 107 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 RNU6-429P-201ENST00000384582 108 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 RNU6-376P-201ENST00000384731 106 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 RNU6-588P-201ENST00000410281 105 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 RNU6-383P-201ENST00000410864 94 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 RNU6-57P-201ENST00000411348 103 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXC13P31276 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.71□□□□□ -2.14
HOXC13P31276 JTBP1-201ENST00000441314 247 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 HSPE1P24-201ENST00000450782 238 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 RNU7-141P-201ENST00000459304 62 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 AC092991.1-201ENST00000477176 376 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 PDCD5P2-201ENST00000507570 312 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXC13P31276 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXC13P31276 MIR6844-201ENST00000637122 62 ntBASIC1.71□□□□□ -2.14
HOXC13P31276 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HOXC13P31276 RNY1P10-201ENST00000363268 113 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 Y_RNA.116-201ENST00000363292 103 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 RNU6-1205P-201ENST00000363625 106 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 Y_RNA.521-201ENST00000384560 114 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 RNU6-768P-201ENST00000384683 107 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 MIR15B-201ENST00000385045 98 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 MIR616-201ENST00000385293 97 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HOXC13P31276 AL606845.1-201ENST00000404881 255 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 RNA5SP504-201ENST00000410676 117 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 AC245047.4-201ENST00000433189 144 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 RPS29P23-201ENST00000458635 123 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 RNU6-659P-201ENST00000516454 104 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 MIR6129-201ENST00000616087 109 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 snoZ196.1-201ENST00000625269 89 ntBASIC1.7□□□□□ -2.14
HOXC13P31276 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.7□□□□□ -2.14
HOXC13P31276 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
HOXC13P31276 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
HOXC13P31276 RNU6-235P-201ENST00000362644 107 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 snoU2-30.2-201ENST00000362805 70 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 Y_RNA.229-201ENST00000364347 113 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 Y_RNA.243-201ENST00000364481 109 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 Y_RNA.294-201ENST00000364916 102 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 Y_RNA.310-201ENST00000365063 113 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 RNU6-643P-201ENST00000384018 107 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 RNY4P18-201ENST00000391107 89 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 MIR1323-201ENST00000408090 73 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 MIR1276-201ENST00000408707 83 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 RNU6-710P-201ENST00000410424 105 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC13P31276 RNU1-98P-201ENST00000458992 160 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 AP001328.1-201ENST00000528550 176 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC13P31276 MIR4724-201ENST00000579485 89 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 U6.115-201ENST00000636045 103 ntBASIC1.69□□□□□ -2.14
HOXC13P31276 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HOXC13P31276 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HOXC13P31276 RNU6-1298P-201ENST00000362456 101 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 U8.7-201ENST00000364940 136 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 Y_RNA.327-201ENST00000365201 102 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 Y_RNA.368-201ENST00000365547 113 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 RNU6-1336P-201ENST00000383886 109 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 Y_RNA.456-201ENST00000384232 111 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 MIR515-2-201ENST00000384883 83 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 MIR515-1-201ENST00000384884 83 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 RNU6-1064P-201ENST00000410626 104 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 Y_RNA.622-201ENST00000411091 108 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 AC004965.1-201ENST00000413033 213 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 AC008134.1-201ENST00000420943 193 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 HMGN2P34-201ENST00000437647 269 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXC13P31276 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 AC117454.1-201ENST00000491120 168 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 AC015720.1-201ENST00000565251 277 ntBASIC1.68□□□□□ -2.14
HOXC13P31276 AL121890.5-201ENST00000620848 304 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms