Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MIR4448-201ENST00000584360 86 ntBASIC2.12□□□□□ -2.07
PTX3P26022 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
PTX3P26022 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PTX3P26022 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PTX3P26022 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
PTX3P26022 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PTX3P26022 MIR539-201ENST00000365690 78 ntBASIC2.11□□□□□ -2.07
PTX3P26022 SNORD77.3-201ENST00000391113 65 ntBASIC2.11□□□□□ -2.07
PTX3P26022 RNU6-460P-201ENST00000391158 108 ntBASIC2.11□□□□□ -2.07
PTX3P26022 RNU4-53P-201ENST00000410828 140 ntBASIC2.11□□□□□ -2.07
PTX3P26022 AF228730.3-201ENST00000436691 102 ntBASIC2.11□□□□□ -2.07
PTX3P26022 RNA5SP272-201ENST00000516095 111 ntBASIC2.11□□□□□ -2.07
PTX3P26022 AC022254.1-201ENST00000567857 235 ntBASIC2.11□□□□□ -2.07
PTX3P26022 U7.2-201ENST00000607576 63 ntBASIC2.11□□□□□ -2.07
PTX3P26022 SNORD3E-202ENST00000627253 216 ntBASIC2.11□□□□□ -2.07
PTX3P26022 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PTX3P26022 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PTX3P26022 SNORD18B-201ENST00000365659 72 ntBASIC2.1□□□□□ -2.07
PTX3P26022 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
PTX3P26022 CYCSP49-201ENST00000420810 319 ntBASIC2.1□□□□□ -2.07
PTX3P26022 AL445646.1-201ENST00000431784 216 ntBASIC2.1□□□□□ -2.07
PTX3P26022 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
PTX3P26022 AC015726.2-201ENST00000620112 122 ntBASIC2.1□□□□□ -2.07
PTX3P26022 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PTX3P26022 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PTX3P26022 Y_RNA.37-201ENST00000362606 108 ntBASIC2.09□□□□□ -2.07
PTX3P26022 RNY1P11-201ENST00000363759 113 ntBASIC2.09□□□□□ -2.07
PTX3P26022 RNU6-1189P-201ENST00000383958 107 ntBASIC2.09□□□□□ -2.07
PTX3P26022 SNORA20-201ENST00000384662 132 ntBASIC2.09□□□□□ -2.07
PTX3P26022 RNU6-959P-201ENST00000384671 107 ntBASIC2.09□□□□□ -2.07
PTX3P26022 MTATP6P21-201ENST00000440681 189 ntBASIC2.09□□□□□ -2.07
PTX3P26022 RPL23AP6-201ENST00000446637 472 ntBASIC2.09□□□□□ -2.07
PTX3P26022 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PTX3P26022 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
PTX3P26022 Y_RNA.52-201ENST00000362760 96 ntBASIC2.08□□□□□ -2.08
PTX3P26022 RNU6-414P-201ENST00000363705 104 ntBASIC2.08□□□□□ -2.08
PTX3P26022 RNU6-915P-201ENST00000364943 103 ntBASIC2.08□□□□□ -2.08
PTX3P26022 MIR194-1-201ENST00000384892 85 ntBASIC2.08□□□□□ -2.08
PTX3P26022 MIR136-201ENST00000385207 82 ntBASIC2.08□□□□□ -2.08
PTX3P26022 AL603914.1-201ENST00000401964 204 ntBASIC2.08□□□□□ -2.08
PTX3P26022 MIR4713-201ENST00000582691 75 ntBASIC2.08□□□□□ -2.08
PTX3P26022 MIR5197-201ENST00000583721 112 ntBASIC2.08□□□□□ -2.08
PTX3P26022 RNU4-82P-201ENST00000362443 140 ntBASIC2.07□□□□□ -2.08
PTX3P26022 RNU6-1117P-201ENST00000384525 104 ntBASIC2.07□□□□□ -2.08
PTX3P26022 AC004965.1-201ENST00000413033 213 ntBASIC2.07□□□□□ -2.08
PTX3P26022 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.07□□□□□ -2.08
PTX3P26022 AL606753.1-201ENST00000427435 87 ntBASIC2.07□□□□□ -2.08
PTX3P26022 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.07□□□□□ -2.08
PTX3P26022 JTBP1-201ENST00000441314 247 ntBASIC2.07□□□□□ -2.08
PTX3P26022 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
PTX3P26022 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
PTX3P26022 RNU4-57P-201ENST00000515980 135 ntBASIC2.07□□□□□ -2.08
PTX3P26022 Y_RNA.692-201ENST00000516627 105 ntBASIC2.07□□□□□ -2.08
PTX3P26022 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
PTX3P26022 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
PTX3P26022 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.07□□□□□ -2.08
PTX3P26022 Y_RNA.757-201ENST00000578934 114 ntBASIC2.07□□□□□ -2.08
PTX3P26022 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
PTX3P26022 RN7SKP192-201ENST00000411291 327 ntBASIC2.06□□□□□ -2.08
PTX3P26022 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
PTX3P26022 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
PTX3P26022 AC093850.1-201ENST00000454121 251 ntBASIC2.06□□□□□ -2.08
PTX3P26022 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
PTX3P26022 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.06□□□□□ -2.08
PTX3P26022 AC011603.4-201ENST00000611325 277 ntBASIC2.06□□□□□ -2.08
PTX3P26022 MIR6852-201ENST00000621699 66 ntBASIC2.06□□□□□ -2.08
PTX3P26022 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PTX3P26022 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PTX3P26022 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
PTX3P26022 U8.1-201ENST00000362843 134 ntBASIC2.05□□□□□ -2.08
PTX3P26022 RNU6-203P-201ENST00000384038 104 ntBASIC2.05□□□□□ -2.08
PTX3P26022 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PTX3P26022 AP003484.1-201ENST00000530974 250 ntBASIC2.05□□□□□ -2.08
PTX3P26022 MIR4778-201ENST00000577635 80 ntBASIC2.05□□□□□ -2.08
PTX3P26022 MIR4299-201ENST00000577899 72 ntBASIC2.05□□□□□ -2.08
PTX3P26022 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.05□□□□□ -2.08
PTX3P26022 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
PTX3P26022 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PTX3P26022 MIR449A-201ENST00000362113 91 ntBASIC2.04□□□□□ -2.08
PTX3P26022 SNORA1.2-201ENST00000365189 134 ntBASIC2.04□□□□□ -2.08
PTX3P26022 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PTX3P26022 SNORA40.5-201ENST00000391061 128 ntBASIC2.04□□□□□ -2.08
PTX3P26022 AL627390.1-201ENST00000396055 340 ntBASIC2.04□□□□□ -2.08
PTX3P26022 RNU6-938P-201ENST00000411285 103 ntBASIC2.04□□□□□ -2.08
PTX3P26022 RNU6-62P-201ENST00000516526 102 ntBASIC2.04□□□□□ -2.08
PTX3P26022 SCARNA15-202ENST00000516881 127 ntBASIC2.04□□□□□ -2.08
PTX3P26022 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
PTX3P26022 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
PTX3P26022 MIR548I2-201ENST00000408348 149 ntBASIC2.03□□□□□ -2.08
PTX3P26022 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.03□□□□□ -2.08
PTX3P26022 Y_RNA.686-201ENST00000516548 134 ntBASIC2.03□□□□□ -2.08
PTX3P26022 Y_RNA.690-201ENST00000516603 95 ntBASIC2.03□□□□□ -2.08
PTX3P26022 SNORD36C-201ENST00000516733 66 ntBASIC2.03□□□□□ -2.08
PTX3P26022 RNU6-1149P-201ENST00000516810 97 ntBASIC2.03□□□□□ -2.08
PTX3P26022 RNU2-60P-201ENST00000517290 128 ntBASIC2.03□□□□□ -2.08
PTX3P26022 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
PTX3P26022 MTND5P32-201ENST00000560711 1802 ntBASIC2.03□□□□□ -2.09
PTX3P26022 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-34-201ENST00000362441 82 ntBASIC2.02□□□□□ -2.09
PTX3P26022 SNORD115-12-201ENST00000362583 82 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms