Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 Y_RNA.518-201ENST00000384552 113 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 Y_RNA.587-201ENST00000391210 103 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 RNU4-62P-201ENST00000410125 130 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 Y_RNA.590-201ENST00000410140 107 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 SNORD2.1-201ENST00000458762 69 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 RNU7-41P-201ENST00000515917 61 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 SCARNA15.1-201ENST00000516384 125 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 Y_RNA.679-201ENST00000516416 91 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 RNU6-126P-201ENST00000516685 103 ntBASIC1.22□□□□□ -2.21
UBL4AP11441 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.22□□□□□ -2.21
UBL4AP11441 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
UBL4AP11441 RNU6-1309P-201ENST00000363305 108 ntBASIC1.21□□□□□ -2.22
UBL4AP11441 SNORA1.2-201ENST00000365189 134 ntBASIC1.21□□□□□ -2.22
UBL4AP11441 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
UBL4AP11441 snoU13.25-201ENST00000458945 104 ntBASIC1.21□□□□□ -2.22
UBL4AP11441 RNU6-1045P-201ENST00000516321 107 ntBASIC1.21□□□□□ -2.22
UBL4AP11441 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
UBL4AP11441 AC015726.2-201ENST00000620112 122 ntBASIC1.21□□□□□ -2.22
UBL4AP11441 RNA5SP264-201ENST00000363115 107 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 Y_RNA.352-201ENST00000365439 102 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 Y_RNA.396-201ENST00000383949 103 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 SNORA70.7-201ENST00000384159 133 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 Y_RNA.556-201ENST00000384677 113 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 RNU6-482P-201ENST00000391068 107 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 MTND2P23-201ENST00000422990 651 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 AC108667.1-201ENST00000428618 249 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.2□□□□□ -2.22
UBL4AP11441 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 SNORD77.4-201ENST00000516158 81 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.2□□□□□ -2.22
UBL4AP11441 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
UBL4AP11441 Y_RNA.122-201ENST00000363331 96 ntBASIC1.19□□□□□ -2.22
UBL4AP11441 Y_RNA.133-201ENST00000363428 110 ntBASIC1.19□□□□□ -2.22
UBL4AP11441 RNA5SP48-201ENST00000363969 126 ntBASIC1.19□□□□□ -2.22
UBL4AP11441 MIR1302-3-201ENST00000408128 138 ntBASIC1.19□□□□□ -2.22
UBL4AP11441 RNU6-651P-201ENST00000411040 105 ntBASIC1.19□□□□□ -2.22
UBL4AP11441 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.19□□□□□ -2.22
UBL4AP11441 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.19□□□□□ -2.22
UBL4AP11441 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
UBL4AP11441 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.19□□□□□ -2.22
UBL4AP11441 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.19□□□□□ -2.22
UBL4AP11441 MIR4282-201ENST00000583613 67 ntBASIC1.19□□□□□ -2.22
UBL4AP11441 Y_RNA.229-201ENST00000364347 113 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 Y_RNA.288-201ENST00000364854 92 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 Y_RNA.370-201ENST00000365589 108 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 SNORD28B-201ENST00000390993 75 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.18□□□□□ -2.22
UBL4AP11441 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.18□□□□□ -2.22
UBL4AP11441 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 SNORD127-201ENST00000458892 86 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 RNU7-95P-201ENST00000459222 64 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 RNU7-21P-201ENST00000459430 62 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 RPS26P48-201ENST00000491713 339 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 RNU4-57P-201ENST00000515980 135 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 RNU7-181P-201ENST00000517234 74 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 AC100767.1-201ENST00000528178 123 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 AP003716.2-201ENST00000528260 108 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 AC012433.1-201ENST00000588916 398 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 AC008133.2-201ENST00000624540 351 ntBASIC1.18□□□□□ -2.22
UBL4AP11441 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
UBL4AP11441 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
UBL4AP11441 RNY3P5-201ENST00000384127 102 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 Y_RNA.486-201ENST00000384398 107 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 Y_RNA.537-201ENST00000384626 109 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 Y_RNA.572-201ENST00000384757 98 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 RNU2-55P-201ENST00000411146 174 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.17□□□□□ -2.22
UBL4AP11441 MTCYBP9-201ENST00000431021 303 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.17□□□□□ -2.22
UBL4AP11441 RNU7-90P-201ENST00000459216 62 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 Y_RNA.638-201ENST00000459374 113 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.17□□□□□ -2.22
UBL4AP11441 MIR4251-201ENST00000635819 61 ntBASIC1.17□□□□□ -2.22
UBL4AP11441 MIR103A2-201ENST00000362154 78 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 SNORA25.3-201ENST00000363205 127 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 Y_RNA.140-201ENST00000363474 103 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 SNORA7.1-201ENST00000363750 139 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 Y_RNA.547-201ENST00000384654 119 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 MIR548O-201ENST00000408583 114 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.16□□□□□ -2.22
UBL4AP11441 SCARNA8-201ENST00000515924 131 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 Y_RNA.666-201ENST00000516187 112 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 RNU7-25P-201ENST00000516544 62 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 RNU11-2P-201ENST00000516898 142 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 AL365265.1-201ENST00000621045 234 ntBASIC1.16□□□□□ -2.22
UBL4AP11441 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
UBL4AP11441 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.22
UBL4AP11441 Y_RNA.54-201ENST00000362766 105 ntBASIC1.15□□□□□ -2.23
UBL4AP11441 Y_RNA.304-201ENST00000365011 112 ntBASIC1.15□□□□□ -2.23
UBL4AP11441 MIR548H3-201ENST00000408771 118 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 241.5 ms