Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC015726.2-201ENST00000620112 122 ntBASIC2.51□□□□□ -2.01
SYPP08247 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.5□□□□□ -2.01
SYPP08247 MIR597-201ENST00000384968 97 ntBASIC2.5□□□□□ -2.01
SYPP08247 MIR1283-2-201ENST00000408621 87 ntBASIC2.5□□□□□ -2.01
SYPP08247 HSPE1P9-201ENST00000440046 311 ntBASIC2.5□□□□□ -2.01
SYPP08247 AC087499.4-201ENST00000448505 178 ntBASIC2.5□□□□□ -2.01
SYPP08247 DEFB122-202ENST00000569013 197 ntBASIC2.5□□□□□ -2.01
SYPP08247 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.5□□□□□ -2.01
SYPP08247 ICE2P2-201ENST00000483823 2787 ntBASIC2.5□□□□□ -2.01
SYPP08247 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SYPP08247 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SYPP08247 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SYPP08247 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SYPP08247 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SYPP08247 Y_RNA.116-201ENST00000363292 103 ntBASIC2.49□□□□□ -2.01
SYPP08247 RNU6-690P-201ENST00000365242 106 ntBASIC2.49□□□□□ -2.01
SYPP08247 RNU6-163P-201ENST00000384396 106 ntBASIC2.49□□□□□ -2.01
SYPP08247 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SYPP08247 RNU11-3P-201ENST00000391111 133 ntBASIC2.49□□□□□ -2.01
SYPP08247 RNA5SP89-201ENST00000410300 108 ntBASIC2.49□□□□□ -2.01
SYPP08247 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.49□□□□□ -2.01
SYPP08247 AC069257.2-201ENST00000441819 155 ntBASIC2.49□□□□□ -2.01
SYPP08247 snoU13.23-201ENST00000458863 104 ntBASIC2.49□□□□□ -2.01
SYPP08247 RNU6-168P-201ENST00000516189 101 ntBASIC2.49□□□□□ -2.01
SYPP08247 RNU6-412P-201ENST00000516434 106 ntBASIC2.49□□□□□ -2.01
SYPP08247 RNA5SP170-201ENST00000517150 101 ntBASIC2.49□□□□□ -2.01
SYPP08247 AC002984.1-201ENST00000591692 448 ntBASIC2.49□□□□□ -2.01
SYPP08247 uc_338.28-201ENST00000612082 187 ntBASIC2.49□□□□□ -2.01
SYPP08247 AC027279.3-201ENST00000625055 122 ntBASIC2.49□□□□□ -2.01
SYPP08247 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
SYPP08247 Y_RNA.43-201ENST00000362670 111 ntBASIC2.48□□□□□ -2.01
SYPP08247 Y_RNA.309-201ENST00000365046 111 ntBASIC2.48□□□□□ -2.01
SYPP08247 SNORD38C-201ENST00000384381 69 ntBASIC2.48□□□□□ -2.01
SYPP08247 RN7SKP223-201ENST00000410582 62 ntBASIC2.48□□□□□ -2.01
SYPP08247 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.48□□□□□ -2.01
SYPP08247 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SYPP08247 AL442644.1-201ENST00000454390 3105 ntBASIC2.48□□□□□ -2.01
SYPP08247 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SYPP08247 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SYPP08247 MIR450A1-201ENST00000362262 91 ntBASIC2.47□□□□□ -2.01
SYPP08247 Y_RNA.85-201ENST00000363014 111 ntBASIC2.47□□□□□ -2.01
SYPP08247 SNORA25.6-201ENST00000364121 118 ntBASIC2.47□□□□□ -2.01
SYPP08247 SNORA63D-201ENST00000364359 132 ntBASIC2.47□□□□□ -2.01
SYPP08247 RNU6-1107P-201ENST00000364817 104 ntBASIC2.47□□□□□ -2.01
SYPP08247 RNU1-133P-201ENST00000364867 167 ntBASIC2.47□□□□□ -2.01
SYPP08247 RNY1P6-201ENST00000384193 109 ntBASIC2.47□□□□□ -2.01
SYPP08247 RNU6-106P-201ENST00000384405 107 ntBASIC2.47□□□□□ -2.01
SYPP08247 SNORD12C-201ENST00000386307 89 ntBASIC2.47□□□□□ -2.01
SYPP08247 AL359511.1-201ENST00000402970 211 ntBASIC2.47□□□□□ -2.01
SYPP08247 RN7SKP200-201ENST00000410564 320 ntBASIC2.47□□□□□ -2.01
SYPP08247 AL031737.1-201ENST00000450125 223 ntBASIC2.47□□□□□ -2.01
SYPP08247 RNU6-830P-201ENST00000516353 107 ntBASIC2.47□□□□□ -2.01
SYPP08247 RNY4P20-201ENST00000516678 93 ntBASIC2.47□□□□□ -2.01
SYPP08247 RNU6-826P-201ENST00000516827 104 ntBASIC2.47□□□□□ -2.01
SYPP08247 SNORA18.7-201ENST00000516910 131 ntBASIC2.47□□□□□ -2.01
SYPP08247 RNU7-70P-201ENST00000516941 66 ntBASIC2.47□□□□□ -2.01
SYPP08247 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SYPP08247 SNORA38-201ENST00000363946 132 ntBASIC2.46□□□□□ -2.02
SYPP08247 Y_RNA.198-201ENST00000364013 98 ntBASIC2.46□□□□□ -2.02
SYPP08247 Y_RNA.351-201ENST00000365436 96 ntBASIC2.46□□□□□ -2.02
SYPP08247 Y_RNA.549-201ENST00000384657 102 ntBASIC2.46□□□□□ -2.02
SYPP08247 AC234781.5-201ENST00000508429 271 ntBASIC2.46□□□□□ -2.02
SYPP08247 MIR1273D-201ENST00000577266 86 ntBASIC2.46□□□□□ -2.02
SYPP08247 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SYPP08247 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SYPP08247 VTRNA1-1-201ENST00000363120 99 ntBASIC2.45□□□□□ -2.02
SYPP08247 SNORD114-30-201ENST00000364448 72 ntBASIC2.45□□□□□ -2.02
SYPP08247 RNU6-424P-201ENST00000384367 105 ntBASIC2.45□□□□□ -2.02
SYPP08247 MIR518A2-201ENST00000384966 87 ntBASIC2.45□□□□□ -2.02
SYPP08247 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SYPP08247 RNA5SP465-201ENST00000391195 109 ntBASIC2.45□□□□□ -2.02
SYPP08247 U8.16-201ENST00000391279 133 ntBASIC2.45□□□□□ -2.02
SYPP08247 AL627390.1-201ENST00000396055 340 ntBASIC2.45□□□□□ -2.02
SYPP08247 AL034345.1-201ENST00000407768 123 ntBASIC2.45□□□□□ -2.02
SYPP08247 HMGN2P35-201ENST00000412164 270 ntBASIC2.45□□□□□ -2.02
SYPP08247 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
SYPP08247 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
SYPP08247 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SYPP08247 RNU7-80P-201ENST00000459562 61 ntBASIC2.45□□□□□ -2.02
SYPP08247 RNVU1-2-201ENST00000516326 135 ntBASIC2.45□□□□□ -2.02
SYPP08247 MIR4658-201ENST00000584344 65 ntBASIC2.45□□□□□ -2.02
SYPP08247 AC021443.1-201ENST00000604478 211 ntBASIC2.45□□□□□ -2.02
SYPP08247 AC091932.4-201ENST00000623386 200 ntBASIC2.45□□□□□ -2.02
SYPP08247 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
SYPP08247 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SYPP08247 SNORA4.2-201ENST00000365313 147 ntBASIC2.44□□□□□ -2.02
SYPP08247 RNU6-32P-201ENST00000383948 107 ntBASIC2.44□□□□□ -2.02
SYPP08247 RNU6-13P-201ENST00000384248 107 ntBASIC2.44□□□□□ -2.02
SYPP08247 Y_RNA.495-201ENST00000384435 112 ntBASIC2.44□□□□□ -2.02
SYPP08247 RNU6-12P-201ENST00000384604 107 ntBASIC2.44□□□□□ -2.02
SYPP08247 RNU6-950P-201ENST00000384651 107 ntBASIC2.44□□□□□ -2.02
SYPP08247 RNU6-41P-201ENST00000384741 107 ntBASIC2.44□□□□□ -2.02
SYPP08247 RNU6-554P-201ENST00000410466 106 ntBASIC2.44□□□□□ -2.02
SYPP08247 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.44□□□□□ -2.02
SYPP08247 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.44□□□□□ -2.02
SYPP08247 AC108210.2-201ENST00000503681 201 ntBASIC2.44□□□□□ -2.02
SYPP08247 AL035470.1-201ENST00000622571 220 ntBASIC2.44□□□□□ -2.02
SYPP08247 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SYPP08247 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
SYPP08247 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms