Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU2-70P-201ENST00000410718 179 ntBASIC0□□□□□ -2.41
UPK1BO75841 RNU2-14P-201ENST00000411053 191 ntBASIC0□□□□□ -2.41
UPK1BO75841 RNU7-185P-201ENST00000459215 60 ntBASIC0□□□□□ -2.41
UPK1BO75841 RNU7-141P-201ENST00000459304 62 ntBASIC0□□□□□ -2.41
UPK1BO75841 AC107297.1-201ENST00000459991 176 ntBASIC0□□□□□ -2.41
UPK1BO75841 MIR4423-201ENST00000580922 80 ntBASIC0□□□□□ -2.41
UPK1BO75841 AL355297.3-201ENST00000604082 446 ntBASIC0□□□□□ -2.41
UPK1BO75841 5S_rRNA.15-201ENST00000611169 127 ntBASIC0□□□□□ -2.41
UPK1BO75841 MIR6734-201ENST00000621166 68 ntBASIC0□□□□□ -2.41
UPK1BO75841 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0□□□□□ -2.41
UPK1BO75841 RNU6-623P-201ENST00000363143 105 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 RNA5SP117-201ENST00000365294 118 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 SNORA24-201ENST00000384096 131 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 SNORD38B-201ENST00000384690 67 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 MIR588-201ENST00000384900 83 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 RNU6-913P-201ENST00000390913 95 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 MIR18B-201ENST00000454574 71 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 RNU7-110P-201ENST00000516891 62 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 AC133485.4-201ENST00000561835 220 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 MIR5690-201ENST00000583739 73 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 AC005357.1-201ENST00000588399 301 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 SNORD38B-202ENST00000625943 69 ntBASIC-0.01□□□□□ -2.41
UPK1BO75841 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
UPK1BO75841 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.02□□□□□ -2.41
UPK1BO75841 SNORD114-23-201ENST00000363536 72 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 SNORA63C-201ENST00000364578 129 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 MIR1257-201ENST00000408490 117 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 MIR548O-201ENST00000408583 114 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 HMGN1P33-201ENST00000432945 451 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 RNA5SP436-201ENST00000516020 115 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 RNU6-358P-201ENST00000516564 75 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 AC112693.2-201ENST00000556538 232 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
UPK1BO75841 SNORA36.1-201ENST00000363424 132 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 RNU6-674P-201ENST00000363831 107 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.03□□□□□ -2.41
UPK1BO75841 RNU4-30P-201ENST00000410245 143 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.03□□□□□ -2.41
UPK1BO75841 RNU6-911P-201ENST00000516523 104 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.03□□□□□ -2.41
UPK1BO75841 AC006600.1-201ENST00000572529 153 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.03□□□□□ -2.41
UPK1BO75841 SNORD92-201ENST00000585078 85 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 AC011373.1-201ENST00000607270 237 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.03□□□□□ -2.41
UPK1BO75841 AC022709.1-201ENST00000615967 87 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.03□□□□□ -2.41
UPK1BO75841 AC022306.2-201ENST00000617563 647 ntBASIC-0.03□□□□□ -2.41
UPK1BO75841 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.04□□□□□ -2.42
UPK1BO75841 RNA5SP214-201ENST00000363378 118 ntBASIC-0.04□□□□□ -2.42
UPK1BO75841 SEPT7P4-201ENST00000437076 306 ntBASIC-0.04□□□□□ -2.42
UPK1BO75841 AC010655.3-201ENST00000478818 450 ntBASIC-0.04□□□□□ -2.42
UPK1BO75841 SNORD115-34-201ENST00000362441 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 RNU6-845P-201ENST00000362578 103 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-12-201ENST00000362583 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-29-201ENST00000362834 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-9-201ENST00000362912 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-21-201ENST00000362963 81 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-14-201ENST00000363090 81 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-13-201ENST00000363358 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-41-201ENST00000363608 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-11-201ENST00000363616 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-5-201ENST00000363633 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-39-201ENST00000363694 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-4-201ENST00000363810 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-16-201ENST00000363887 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-6-201ENST00000363942 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 RNU6-801P-201ENST00000364087 105 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-42-201ENST00000364273 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD114-9-201ENST00000364370 72 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-15-201ENST00000364809 81 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-1-201ENST00000364961 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-26-201ENST00000365067 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-10-201ENST00000365073 81 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-43-201ENST00000365503 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-36-201ENST00000365629 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORA72.4-201ENST00000384174 132 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 MIR559-201ENST00000385188 96 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 FCF1P9-201ENST00000412546 282 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 PDCL2P1-201ENST00000419302 352 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 RNU6-448P-201ENST00000517052 107 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 RNU6-699P-201ENST00000517081 110 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.05□□□□□ -2.42
UPK1BO75841 SNORD115-40-201ENST00000606510 82 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 MIR8055-201ENST00000610739 97 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 Z97988.1-201ENST00000637697 135 ntBASIC-0.05□□□□□ -2.42
UPK1BO75841 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
UPK1BO75841 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms