Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNU6-449P-201ENST00000383914 107 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 RNU2-29P-201ENST00000410423 189 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 RNU4-55P-201ENST00000410731 137 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 MIR3941-201ENST00000582572 103 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 uc_338.11-201ENST00000619132 160 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 AC132825.6-201ENST00000638861 357 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RNU4-92P-201ENST00000363783 136 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 SNORD14E-201ENST00000364009 85 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 SNORD114-17-201ENST00000364699 75 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RNU6-393P-201ENST00000384475 107 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RNU6-540P-201ENST00000384622 101 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RPL30P16-201ENST00000419341 429 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RNU6-767P-201ENST00000384132 107 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 AL031667.1-201ENST00000440222 725 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RPL30P10-201ENST00000488148 337 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 AC069113.1-201ENST00000517763 267 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 AC145350.1-201ENST00000567426 208 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 AL158050.2-201ENST00000605336 568 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 AC087752.4-201ENST00000605911 462 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 AC005828.6-201ENST00000606610 232 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 AC109347.2-201ENST00000610220 349 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 AC091931.1-201ENST00000623488 728 ntBASIC-1.87□□□□□ -2.71
RGPD3A6NKT7 RNU4-1-201ENST00000363925 141 ntBASIC-1.88□□□□□ -2.71
RGPD3A6NKT7 RNU6-154P-201ENST00000384306 106 ntBASIC-1.88□□□□□ -2.71
RGPD3A6NKT7 RPS27AP14-201ENST00000422868 454 ntBASIC-1.88□□□□□ -2.71
RGPD3A6NKT7 AC093423.1-201ENST00000440817 142 ntBASIC-1.88□□□□□ -2.71
RGPD3A6NKT7 RNU6-479P-201ENST00000516348 105 ntBASIC-1.88□□□□□ -2.71
RGPD3A6NKT7 AC011373.1-201ENST00000607270 237 ntBASIC-1.88□□□□□ -2.71
RGPD3A6NKT7 AC097460.3-201ENST00000623099 442 ntBASIC-1.88□□□□□ -2.71
RGPD3A6NKT7 RNU6-454P-201ENST00000364292 107 ntBASIC-1.89□□□□□ -2.71
RGPD3A6NKT7 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.89□□□□□ -2.71
RGPD3A6NKT7 RNU4-75P-201ENST00000364621 146 ntBASIC-1.89□□□□□ -2.71
RGPD3A6NKT7 RNU6-913P-201ENST00000390913 95 ntBASIC-1.89□□□□□ -2.71
RGPD3A6NKT7 RNU2-9P-201ENST00000410194 145 ntBASIC-1.89□□□□□ -2.71
RGPD3A6NKT7 MIR3920-201ENST00000581751 86 ntBASIC-1.89□□□□□ -2.71
RGPD3A6NKT7 AC245297.2-201ENST00000610119 565 ntBASIC-1.89□□□□□ -2.71
RGPD3A6NKT7 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 MIR617-201ENST00000385030 97 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 RNA5SP403-201ENST00000363598 108 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 USMG5P1-201ENST00000425964 177 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 AL158053.1-201ENST00000441503 453 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.9□□□□□ -2.71
RGPD3A6NKT7 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 SNORA69-201ENST00000383895 132 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 RNU6-883P-201ENST00000384597 107 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 RNU6-298P-201ENST00000390888 96 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 RNU6-612P-201ENST00000516909 102 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 AC005972.2-201ENST00000604690 348 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 AC099654.12-201ENST00000639868 649 ntBASIC-1.91□□□□□ -2.72
RGPD3A6NKT7 SNORD115-34-201ENST00000362441 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-12-201ENST00000362583 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-29-201ENST00000362834 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-9-201ENST00000362912 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-21-201ENST00000362963 81 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-14-201ENST00000363090 81 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-13-201ENST00000363358 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-11-201ENST00000363616 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-5-201ENST00000363633 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-39-201ENST00000363694 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-4-201ENST00000363810 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-16-201ENST00000363887 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-6-201ENST00000363942 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-15-201ENST00000364809 81 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-1-201ENST00000364961 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-26-201ENST00000365067 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-10-201ENST00000365073 81 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-43-201ENST00000365503 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-36-201ENST00000365629 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 AL137161.1-201ENST00000532231 390 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 SNORD115-40-201ENST00000606510 82 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 JPX_2.1-201ENST00000614161 69 ntBASIC-1.92□□□□□ -2.72
RGPD3A6NKT7 RNU6-973P-201ENST00000364690 107 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 RNU6-207P-201ENST00000384137 107 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 RNU6-576P-201ENST00000390854 102 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 RNU6-325P-201ENST00000411132 105 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 AC244090.1-201ENST00000441884 93 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 AC018714.1-201ENST00000605028 208 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 SNORD70.1-201ENST00000391007 85 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 snoU13.13-201ENST00000458842 104 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 MTCO2P29-201ENST00000465212 189 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 MIR5188-201ENST00000583467 113 ntBASIC-1.93□□□□□ -2.72
RGPD3A6NKT7 MIR5704-201ENST00000584029 77 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms