Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 FTX_2.1-201ENST00000618816 94 ntBASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SLC52A3Q9NQ40 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.121-201ENST00000363309 113 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.233-201ENST00000364407 101 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.338-201ENST00000365320 114 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 RNA5SP496-201ENST00000391240 109 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 STAG3L5P-204ENST00000443759 179 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 AC099513.1-201ENST00000490423 301 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 RPL23AP91-201ENST00000569211 455 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 MIR2681-201ENST00000581814 105 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 AC072026.1-201ENST00000605023 201 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 RNU2-4P-201ENST00000606190 192 ntBASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-103P-201ENST00000363686 107 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.238-201ENST00000364441 102 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 RNA5SP190-201ENST00000365222 118 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.412-201ENST00000384001 104 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-1031P-201ENST00000384773 107 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 MIR522-201ENST00000385071 87 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 MT-TT-201ENST00000387460 66 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 RNA5SP482-201ENST00000391269 118 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 PCNPP3-201ENST00000393579 471 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 PIGPP3-201ENST00000425307 415 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 SNRPGP10-201ENST00000432323 225 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 AC245047.8-201ENST00000456455 284 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 snoU13.27-201ENST00000459278 104 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-1219P-201ENST00000516143 112 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 RNU7-28P-201ENST00000516759 62 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 AC098479.1-201ENST00000609225 154 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.49□□□□□ -2.17
SLC52A3Q9NQ40 WWP1P1-201ENST00000466609 2769 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 MIRLET7C-201ENST00000362160 84 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 MIR424-201ENST00000362227 98 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-950P-201ENST00000384651 107 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 MIR548I3-201ENST00000408378 149 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 MIR1267-201ENST00000408723 78 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 MIR548I1-201ENST00000408810 149 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 AC108729.3-201ENST00000513484 108 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-182P-201ENST00000516970 105 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 AC108706.1-201ENST00000611053 297 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 AC021506.2-201ENST00000612354 169 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 JPX_2.1-201ENST00000614161 69 ntBASIC1.48□□□□□ -2.17
SLC52A3Q9NQ40 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.75-201ENST00000362927 97 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.240-201ENST00000364469 95 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 Y_RNA.265-201ENST00000364677 108 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 AL606845.1-201ENST00000404881 255 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 RN7SKP200-201ENST00000410564 320 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 JTBP1-201ENST00000441314 247 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 SNORD77.4-201ENST00000516158 81 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-1007P-201ENST00000516586 107 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 RNU6-861P-201ENST00000516745 106 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 MIR4709-201ENST00000577272 72 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 MIR4744-201ENST00000581563 82 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 AL049861.1-201ENST00000603130 150 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 SNORA28-201ENST00000606769 126 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 uc_338.4-201ENST00000616635 176 ntBASIC1.47□□□□□ -2.17
SLC52A3Q9NQ40 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 SNORD68-201ENST00000363214 84 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 Y_RNA.182-201ENST00000363880 111 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNU6-275P-201ENST00000364910 107 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNU6-484P-201ENST00000384016 107 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNY3P5-201ENST00000384127 102 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNU6-424P-201ENST00000384367 105 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNU4-70P-201ENST00000384579 139 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 Y_RNA.555-201ENST00000384673 110 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNU6-578P-201ENST00000390980 103 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNU6-1228P-201ENST00000391014 107 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 AL627390.1-201ENST00000396055 340 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 AL034345.1-201ENST00000407768 123 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 CALM2P4-201ENST00000430810 426 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 snoU13.9-201ENST00000458927 103 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNU7-34P-201ENST00000459394 64 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 AC074198.2-201ENST00000508153 258 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 RNU6-561P-201ENST00000516222 102 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 AC109810.1-201ENST00000534066 224 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 AC008507.4-201ENST00000585464 127 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 U6.106-201ENST00000636360 105 ntBASIC1.46□□□□□ -2.18
SLC52A3Q9NQ40 Y_RNA.150-201ENST00000363562 102 ntBASIC1.45□□□□□ -2.18
SLC52A3Q9NQ40 RNU6-1138P-201ENST00000365359 106 ntBASIC1.45□□□□□ -2.18
SLC52A3Q9NQ40 Y_RNA.587-201ENST00000391210 103 ntBASIC1.45□□□□□ -2.18
SLC52A3Q9NQ40 U8.16-201ENST00000391279 133 ntBASIC1.45□□□□□ -2.18
SLC52A3Q9NQ40 RNU5E-9P-201ENST00000411164 104 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms