Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.18□□□□□ -2.22
Q9N2K0 snoU18.1-201ENST00000629629 71 ntBASIC1.18□□□□□ -2.22
Q9N2K0 AL442644.1-201ENST00000454390 3105 ntBASIC1.17□□□□□ -2.22
Q9N2K0 Y_RNA.164-201ENST00000363709 102 ntBASIC1.17□□□□□ -2.22
Q9N2K0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.17□□□□□ -2.22
Q9N2K0 RNU7-43P-201ENST00000516554 64 ntBASIC1.17□□□□□ -2.22
Q9N2K0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.17□□□□□ -2.22
Q9N2K0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.17□□□□□ -2.22
Q9N2K0 AL360085.1-201ENST00000604713 532 ntBASIC1.17□□□□□ -2.22
Q9N2K0 Y_RNA.802-201ENST00000614892 130 ntBASIC1.17□□□□□ -2.22
Q9N2K0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
Q9N2K0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
Q9N2K0 RNU6-1289P-201ENST00000384431 106 ntBASIC1.16□□□□□ -2.22
Q9N2K0 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
Q9N2K0 MIR516B2-201ENST00000385190 85 ntBASIC1.16□□□□□ -2.22
Q9N2K0 AL358176.2-201ENST00000425769 204 ntBASIC1.16□□□□□ -2.22
Q9N2K0 RNU6-947P-201ENST00000516264 106 ntBASIC1.16□□□□□ -2.22
Q9N2K0 RNU6-327P-201ENST00000516270 127 ntBASIC1.16□□□□□ -2.22
Q9N2K0 RNU6-830P-201ENST00000516353 107 ntBASIC1.16□□□□□ -2.22
Q9N2K0 RNU6-126P-201ENST00000516685 103 ntBASIC1.16□□□□□ -2.22
Q9N2K0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.16□□□□□ -2.22
Q9N2K0 AL021707.8-201ENST00000609428 183 ntBASIC1.16□□□□□ -2.22
Q9N2K0 AL008718.3-201ENST00000610217 321 ntBASIC1.16□□□□□ -2.22
Q9N2K0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Q9N2K0 MIR378A-201ENST00000362177 66 ntBASIC1.15□□□□□ -2.23
Q9N2K0 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.47-201ENST00000362697 108 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.82-201ENST00000363000 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.92-201ENST00000363043 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.235-201ENST00000364412 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.306-201ENST00000365015 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.312-201ENST00000365089 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.322-201ENST00000365151 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 RNU6-211P-201ENST00000384047 107 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.512-201ENST00000384518 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.556-201ENST00000384677 113 ntBASIC1.15□□□□□ -2.23
Q9N2K0 SNORA8.3-201ENST00000384679 139 ntBASIC1.15□□□□□ -2.23
Q9N2K0 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
Q9N2K0 MIR1302-3-201ENST00000408128 138 ntBASIC1.15□□□□□ -2.23
Q9N2K0 MIR1278-201ENST00000408753 81 ntBASIC1.15□□□□□ -2.23
Q9N2K0 SNRPGP14-201ENST00000435400 219 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.650-201ENST00000459002 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.777-201ENST00000516982 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.15□□□□□ -2.23
Q9N2K0 MIR4662B-201ENST00000579498 81 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.771-201ENST00000598668 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 AC006006.1-201ENST00000603082 144 ntBASIC1.15□□□□□ -2.23
Q9N2K0 AC006441.5-201ENST00000612680 209 ntBASIC1.15□□□□□ -2.23
Q9N2K0 uc_338.4-201ENST00000616635 176 ntBASIC1.15□□□□□ -2.23
Q9N2K0 Y_RNA.789-201ENST00000622480 102 ntBASIC1.15□□□□□ -2.23
Q9N2K0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.14□□□□□ -2.23
Q9N2K0 Y_RNA.4-201ENST00000362333 112 ntBASIC1.14□□□□□ -2.23
Q9N2K0 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
Q9N2K0 Y_RNA.162-201ENST00000363683 102 ntBASIC1.14□□□□□ -2.23
Q9N2K0 RNU6-1138P-201ENST00000365359 106 ntBASIC1.14□□□□□ -2.23
Q9N2K0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.14□□□□□ -2.23
Q9N2K0 AC245047.7-201ENST00000440265 293 ntBASIC1.14□□□□□ -2.23
Q9N2K0 MTCO2P24-201ENST00000515611 426 ntBASIC1.14□□□□□ -2.23
Q9N2K0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.14□□□□□ -2.23
Q9N2K0 SNORA31.2-201ENST00000516019 134 ntBASIC1.14□□□□□ -2.23
Q9N2K0 RNU6-1045P-201ENST00000516321 107 ntBASIC1.14□□□□□ -2.23
Q9N2K0 AL645939.4-201ENST00000604495 135 ntBASIC1.14□□□□□ -2.23
Q9N2K0 RNU6-268P-201ENST00000364174 107 ntBASIC1.13□□□□□ -2.23
Q9N2K0 Y_RNA.352-201ENST00000365439 102 ntBASIC1.13□□□□□ -2.23
Q9N2K0 Y_RNA.483-201ENST00000384380 101 ntBASIC1.13□□□□□ -2.23
Q9N2K0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.13□□□□□ -2.23
Q9N2K0 MIR520C-201ENST00000385005 87 ntBASIC1.13□□□□□ -2.23
Q9N2K0 MT-TW-201ENST00000387382 68 ntBASIC1.13□□□□□ -2.23
Q9N2K0 SNORA67.5-201ENST00000391036 107 ntBASIC1.13□□□□□ -2.23
Q9N2K0 AL078595.1-201ENST00000404458 226 ntBASIC1.13□□□□□ -2.23
Q9N2K0 RNU6-383P-201ENST00000410864 94 ntBASIC1.13□□□□□ -2.23
Q9N2K0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.13□□□□□ -2.23
Q9N2K0 SNORD2.1-201ENST00000458762 69 ntBASIC1.13□□□□□ -2.23
Q9N2K0 SNORD123-201ENST00000459473 70 ntBASIC1.13□□□□□ -2.23
Q9N2K0 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
Q9N2K0 SCARNA15.1-201ENST00000516384 125 ntBASIC1.13□□□□□ -2.23
Q9N2K0 SNORA18.7-201ENST00000516910 131 ntBASIC1.13□□□□□ -2.23
Q9N2K0 SNORA70.22-201ENST00000517160 124 ntBASIC1.13□□□□□ -2.23
Q9N2K0 AC019288.1-201ENST00000557918 224 ntBASIC1.13□□□□□ -2.23
Q9N2K0 MIR4498-201ENST00000577599 66 ntBASIC1.13□□□□□ -2.23
Q9N2K0 Pinc.1-201ENST00000616452 154 ntBASIC1.13□□□□□ -2.23
Q9N2K0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.13□□□□□ -2.23
Q9N2K0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.13□□□□□ -2.23
Q9N2K0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Q9N2K0 RNU6-1309P-201ENST00000363305 108 ntBASIC1.12□□□□□ -2.23
Q9N2K0 RNA5SP48-201ENST00000363969 126 ntBASIC1.12□□□□□ -2.23
Q9N2K0 RNU6-740P-201ENST00000364734 105 ntBASIC1.12□□□□□ -2.23
Q9N2K0 RNU6-472P-201ENST00000384299 107 ntBASIC1.12□□□□□ -2.23
Q9N2K0 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
Q9N2K0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Q9N2K0 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
Q9N2K0 AL603910.2-201ENST00000407268 136 ntBASIC1.12□□□□□ -2.23
Q9N2K0 COX6CP14-201ENST00000469580 174 ntBASIC1.12□□□□□ -2.23
Q9N2K0 RNU7-149P-201ENST00000516739 59 ntBASIC1.12□□□□□ -2.23
Q9N2K0 AC068338.1-201ENST00000565567 176 ntBASIC1.12□□□□□ -2.23
Q9N2K0 MIR4764-201ENST00000580680 88 ntBASIC1.12□□□□□ -2.23
Q9N2K0 MIR4303-201ENST00000581299 66 ntBASIC1.12□□□□□ -2.23
Q9N2K0 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
Q9N2K0 AL096861.1-201ENST00000610899 123 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms