Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP3-1Q9BYR8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP124-201ENST00000362739 110 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 RNY1P13-201ENST00000365030 105 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 SNORD38B-201ENST00000384690 67 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU6-1237P-201ENST00000384777 107 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 RN7SKP220-201ENST00000410611 288 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 AC006989.1-201ENST00000427212 131 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 AC092427.1-202ENST00000430569 476 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 snoU13.11-201ENST00000459219 104 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 AC099513.1-201ENST00000490423 301 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 RNVU1-2-201ENST00000516326 135 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU7-153P-201ENST00000516455 62 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 AL512598.1-201ENST00000610158 273 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 SNORD38B-202ENST00000625943 69 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 SCARNA15.3-201ENST00000626315 122 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 SCARNA4.1-201ENST00000628597 123 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 AC131280.1-202ENST00000624067 4211 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 MAPK10-362ENST00000641864 4484 ntBASIC1.86□□□□□ -2.11
KRTAP3-1Q9BYR8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU6-478P-201ENST00000363904 110 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU1-148P-201ENST00000384472 162 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR520C-201ENST00000385005 87 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR1283-2-201ENST00000408621 87 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 HMGN2P3-201ENST00000433603 273 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 HMGN2P5-201ENST00000436882 273 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 AC027119.1-201ENST00000440877 241 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 BX510359.1-201ENST00000456973 237 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 SNORD4B-201ENST00000459083 72 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 AC090255.1-201ENST00000495779 349 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR2276-201ENST00000516886 89 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 AC026333.2-201ENST00000542164 106 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 AC141846.1-201ENST00000568348 142 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 AL606490.9-201ENST00000603331 271 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 AC022149.2-201ENST00000621061 203 ntBASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP3-1Q9BYR8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 Y_RNA.57-201ENST00000362806 113 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 RNY1P2-201ENST00000364820 117 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 Z98742.3-201ENST00000418637 326 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU7-26P-201ENST00000458980 63 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 AC006463.2-201ENST00000473326 348 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP164-201ENST00000516533 110 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU6-557P-201ENST00000516842 110 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 RNU1-45P-201ENST00000517191 141 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 SUB1P4-201ENST00000566062 339 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 MIR4644-201ENST00000579929 84 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 RNA5SP196-201ENST00000625967 102 ntBASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP3-1Q9BYR8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP3-1Q9BYR8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP3-1Q9BYR8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
KRTAP3-1Q9BYR8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP3-1Q9BYR8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP3-1Q9BYR8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-624P-201ENST00000363411 107 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-112P-201ENST00000363599 104 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 SNORA38-201ENST00000363946 132 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP72-201ENST00000364442 117 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 RNA5SP51-201ENST00000364750 119 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-296P-201ENST00000384608 107 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR518A2-201ENST00000384966 87 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 SNORA3.3-201ENST00000408712 125 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 ARF4P2-201ENST00000430209 526 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 AL117339.2-201ENST00000430475 180 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 AL450471.1-201ENST00000447509 127 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 RPS29P22-201ENST00000472363 168 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 AC004223.1-201ENST00000479840 271 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 RNU6-579P-201ENST00000516879 102 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR548AO-201ENST00000579992 96 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR3939-201ENST00000582614 106 ntBASIC1.83□□□□□ -2.12
KRTAP3-1Q9BYR8 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms