Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 Y_RNA.163-201ENST00000363702 113 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 RNY1P6-201ENST00000384193 109 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 RNU7-80P-201ENST00000459562 61 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 RNY4P20-201ENST00000516678 93 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 MIR4778-201ENST00000577635 80 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 AC006023.1-201ENST00000603944 259 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 AC021443.1-201ENST00000604478 211 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 AC015726.2-201ENST00000620112 122 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 AC009831.4-201ENST00000620744 325 ntBASIC2.84□□□□□ -1.95
TRIM56Q9BRZ2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TRIM56Q9BRZ2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TRIM56Q9BRZ2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.454-201ENST00000384224 113 ntBASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 SNORD38C-201ENST00000384381 69 ntBASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 AL139132.1-201ENST00000431587 344 ntBASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 SNORA18.7-201ENST00000516910 131 ntBASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 AP003484.1-201ENST00000530974 250 ntBASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM56Q9BRZ2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-349P-201ENST00000362402 107 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-756P-201ENST00000383997 107 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.440-201ENST00000384120 114 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-1113P-201ENST00000384348 107 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.549-201ENST00000384657 102 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 U8.17-201ENST00000391292 132 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 BX510359.4-201ENST00000423750 193 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 SNORD36C-201ENST00000516733 66 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-826P-201ENST00000516827 104 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 MIR5582-201ENST00000579697 68 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.82□□□□□ -1.96
TRIM56Q9BRZ2 SNORA63.5-201ENST00000363548 123 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 AL627390.1-201ENST00000396055 340 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 STAG3L5P-204ENST00000443759 179 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 RN7SL429P-201ENST00000479090 223 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 RN7SL489P-201ENST00000486185 223 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 RN7SL327P-201ENST00000488659 223 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 IGKV3-31-201ENST00000523109 329 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 RPL12P50-201ENST00000603116 116 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 AC022202.1-201ENST00000613515 211 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 RN7SL853P-201ENST00000617250 223 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 AC096644.4-201ENST00000563417 2912 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
TRIM56Q9BRZ2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-414P-201ENST00000363705 104 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.323-201ENST00000365157 109 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.328-201ENST00000365208 113 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.369-201ENST00000365568 117 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-1014P-201ENST00000383940 103 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 SNORA51.5-201ENST00000384126 131 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-851P-201ENST00000384565 107 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 RNA5SP109-201ENST00000391010 116 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 RNU11-3P-201ENST00000391111 133 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 AL606517.2-201ENST00000442855 241 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 RPL39P34-201ENST00000477141 156 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 SNORA9.3-201ENST00000516383 129 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 AC084364.2-201ENST00000546924 395 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 AC079600.2-201ENST00000550076 130 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 ZNF861P-201ENST00000588126 639 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-94P-201ENST00000607728 107 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 MIR8054-201ENST00000620877 86 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 AL035470.1-201ENST00000622571 220 ntBASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
TRIM56Q9BRZ2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.298-201ENST00000364960 107 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.351-201ENST00000365436 96 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-301P-201ENST00000384277 107 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-163P-201ENST00000384396 106 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 MIR518A2-201ENST00000384966 87 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-440P-201ENST00000390882 105 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 HMGN2P39-201ENST00000398005 273 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 MIR1283-2-201ENST00000408621 87 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 RNA5SP281-201ENST00000516504 135 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 AC007336.1-201ENST00000576365 3828 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 MIR3162-201ENST00000581818 82 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 AC027279.3-201ENST00000625055 122 ntBASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM56Q9BRZ2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 SNORA63D-201ENST00000364359 132 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 Y_RNA.362-201ENST00000365518 110 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 RNY4P30-201ENST00000410216 95 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 RN7SKP200-201ENST00000410564 320 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 RNU6-938P-201ENST00000411285 103 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 RNU7-164P-201ENST00000459221 62 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 AC114811.1-201ENST00000507207 168 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms