Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC099654.12-201ENST00000639868 649 ntBASIC-1.89□□□□□ -2.71
GAFA1Q96PS6 SNORD74.6-201ENST00000364796 70 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 SNORD73A-201ENST00000386062 65 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 SNORD70.1-201ENST00000391007 85 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 AC119618.1-201ENST00000434191 222 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 FCF1P4-201ENST00000448326 183 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 RNU6-966P-201ENST00000516479 104 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 MTATP6P15-201ENST00000527233 835 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 AL158050.2-201ENST00000605336 568 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 AC112487.2-201ENST00000637950 304 ntBASIC-1.9□□□□□ -2.71
GAFA1Q96PS6 RNU6-280P-201ENST00000364145 104 ntBASIC-1.91□□□□□ -2.72
GAFA1Q96PS6 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.91□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.91□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.91□□□□□ -2.72
GAFA1Q96PS6 MTND4LP18-201ENST00000526864 291 ntBASIC-1.91□□□□□ -2.72
GAFA1Q96PS6 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.91□□□□□ -2.72
GAFA1Q96PS6 AC016911.1-201ENST00000613297 452 ntBASIC-1.91□□□□□ -2.72
GAFA1Q96PS6 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 RNU4-75P-201ENST00000364621 146 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 RNU6-159P-201ENST00000391080 106 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 AL031667.1-201ENST00000440222 725 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 AC005972.2-201ENST00000604690 348 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 AP000942.4-201ENST00000604811 241 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 AC007671.2-201ENST00000637344 619 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 AC132825.6-201ENST00000638861 357 ntBASIC-1.92□□□□□ -2.72
GAFA1Q96PS6 SNORD115-34-201ENST00000362441 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-12-201ENST00000362583 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-29-201ENST00000362834 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-9-201ENST00000362912 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-21-201ENST00000362963 81 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-14-201ENST00000363090 81 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-13-201ENST00000363358 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-11-201ENST00000363616 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-5-201ENST00000363633 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-39-201ENST00000363694 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-4-201ENST00000363810 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-16-201ENST00000363887 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-6-201ENST00000363942 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-32-201ENST00000364079 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 RNU1-141P-201ENST00000364623 158 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-15-201ENST00000364809 81 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-1-201ENST00000364961 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-26-201ENST00000365067 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-10-201ENST00000365073 81 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-43-201ENST00000365503 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-36-201ENST00000365629 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 MTND2P18-201ENST00000419962 1030 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 AC026421.1-201ENST00000519101 163 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 UBL5P4-201ENST00000562584 236 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 SNORD115-40-201ENST00000606510 82 ntBASIC-1.93□□□□□ -2.72
GAFA1Q96PS6 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 MIR1468-201ENST00000410600 86 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 MTND3P8-201ENST00000412909 339 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 ELOCP4-201ENST00000420090 333 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 RPL22P17-201ENST00000438729 315 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 MIR3941-201ENST00000582572 103 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 U6.114-201ENST00000636407 96 ntBASIC-1.94□□□□□ -2.72
GAFA1Q96PS6 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 RNU6-325P-201ENST00000411132 105 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 MTND2P30-201ENST00000456663 382 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 RNU6-551P-201ENST00000516661 103 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 MIR548AE1-201ENST00000583292 70 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 MIR5704-201ENST00000584029 77 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 PIGPP4-201ENST00000584447 307 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 AC145423.2-201ENST00000610631 239 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 AC011603.4-201ENST00000611325 277 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 AC006386.1-201ENST00000619436 415 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 AC009248.2-201ENST00000619826 254 ntBASIC-1.95□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 RNU6-973P-201ENST00000364690 107 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 RNU6-154P-201ENST00000384306 106 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 RNA5SP237-201ENST00000410414 113 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 RNU4-55P-201ENST00000410731 137 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 MTND1P11-201ENST00000456661 876 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 SERF1AP1-201ENST00000514575 187 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 RNU7-53P-201ENST00000516705 60 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 SNORA40.17-201ENST00000517256 115 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 AC080013.3-201ENST00000606839 578 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 AC069503.3-201ENST00000618674 145 ntBASIC-1.96□□□□□ -2.72
GAFA1Q96PS6 SNORD115-35-201ENST00000365122 82 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms