Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AL591926.4-201ENST00000616895 298 ntBASIC2.35□□□□□ -2.03
RTF1Q92541 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
RTF1Q92541 RNU6-774P-201ENST00000363238 107 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 Y_RNA.242-201ENST00000364473 110 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 RNU6-1130P-201ENST00000365434 107 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 SNORD116-18-201ENST00000383961 92 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 RNA5SP482-201ENST00000391269 118 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 RNA5SP501-201ENST00000410990 112 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 AC006461.1-201ENST00000412637 326 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RTF1Q92541 NDUFA4P2-201ENST00000489989 244 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 RNU6-197P-201ENST00000516680 100 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 MIR4762-201ENST00000585261 75 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 MIR8081-201ENST00000611533 95 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 MIR8054-201ENST00000620877 86 ntBASIC2.34□□□□□ -2.03
RTF1Q92541 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
RTF1Q92541 MIR126-201ENST00000362291 85 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 U8.5-201ENST00000364528 136 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 SNORA16B-201ENST00000364674 135 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 RNU6-950P-201ENST00000384651 107 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 MIR522-201ENST00000385071 87 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 SNORA26-201ENST00000391286 122 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 RNA5SP450-201ENST00000411206 102 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 FTH1P12-201ENST00000432137 551 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 RNU7-149P-201ENST00000516739 59 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 RNU6-250P-201ENST00000516958 103 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 DNAJC19P2-201ENST00000593340 302 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 AC097639.2-201ENST00000603159 172 ntBASIC2.33□□□□□ -2.04
RTF1Q92541 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RTF1Q92541 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RTF1Q92541 MIR520A-201ENST00000384862 85 ntBASIC2.32□□□□□ -2.04
RTF1Q92541 RNU6-440P-201ENST00000390882 105 ntBASIC2.32□□□□□ -2.04
RTF1Q92541 RNU6-131P-201ENST00000391144 107 ntBASIC2.32□□□□□ -2.04
RTF1Q92541 AL627390.1-201ENST00000396055 340 ntBASIC2.32□□□□□ -2.04
RTF1Q92541 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.32□□□□□ -2.04
RTF1Q92541 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
RTF1Q92541 SNORA28-201ENST00000606769 126 ntBASIC2.32□□□□□ -2.04
RTF1Q92541 Pinc.1-201ENST00000616452 154 ntBASIC2.32□□□□□ -2.04
RTF1Q92541 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
RTF1Q92541 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RTF1Q92541 Y_RNA.265-201ENST00000364677 108 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 RNA5SP190-201ENST00000365222 118 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 Y_RNA.400-201ENST00000383963 111 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 SUMO2P12-201ENST00000405924 140 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 RNU2-40P-201ENST00000410833 196 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 RNU4-61P-201ENST00000411243 107 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.31□□□□□ -2.04
RTF1Q92541 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.31□□□□□ -2.04
RTF1Q92541 MIR3683-201ENST00000580847 82 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 AC008507.4-201ENST00000585464 127 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.31□□□□□ -2.04
RTF1Q92541 Y_RNA.778-201ENST00000620203 90 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 uc_338.20-201ENST00000621563 178 ntBASIC2.31□□□□□ -2.04
RTF1Q92541 RNU6-112P-201ENST00000363599 104 ntBASIC2.3□□□□□ -2.04
RTF1Q92541 SNORA12.1-201ENST00000390873 148 ntBASIC2.3□□□□□ -2.04
RTF1Q92541 RN7SKP200-201ENST00000410564 320 ntBASIC2.3□□□□□ -2.04
RTF1Q92541 RNU2-19P-201ENST00000517288 84 ntBASIC2.3□□□□□ -2.04
RTF1Q92541 MIR3646-201ENST00000578301 84 ntBASIC2.3□□□□□ -2.04
RTF1Q92541 MIR378D2-201ENST00000580636 98 ntBASIC2.3□□□□□ -2.04
RTF1Q92541 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.3□□□□□ -2.04
RTF1Q92541 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RTF1Q92541 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RTF1Q92541 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RTF1Q92541 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
RTF1Q92541 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RTF1Q92541 Y_RNA.634-201ENST00000364811 113 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 SNORD50.2-201ENST00000365465 70 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 RNU6-187P-201ENST00000384139 106 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 RNU6-296P-201ENST00000384608 107 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 RNU2-70P-201ENST00000410718 179 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.29□□□□□ -2.04
RTF1Q92541 RNA5SP233-201ENST00000459153 113 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 MRPS17P9-201ENST00000511924 393 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 SNORA31.10-201ENST00000516482 106 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.29□□□□□ -2.04
RTF1Q92541 MIR4419B-201ENST00000577260 68 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.29□□□□□ -2.04
RTF1Q92541 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RTF1Q92541 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
RTF1Q92541 SNORD68-201ENST00000363214 84 ntBASIC2.28□□□□□ -2.04
RTF1Q92541 RNU6-597P-201ENST00000365620 102 ntBASIC2.28□□□□□ -2.04
RTF1Q92541 Y_RNA.393-201ENST00000383936 102 ntBASIC2.28□□□□□ -2.04
RTF1Q92541 MLLT10P1-201ENST00000418346 262 ntBASIC2.28□□□□□ -2.04
RTF1Q92541 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.28□□□□□ -2.04
RTF1Q92541 RNA5SP481-201ENST00000516814 122 ntBASIC2.28□□□□□ -2.04
RTF1Q92541 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.28□□□□□ -2.04
RTF1Q92541 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
RTF1Q92541 RNU6-151P-201ENST00000364158 107 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 Y_RNA.486-201ENST00000384398 107 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 Y_RNA.521-201ENST00000384560 114 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 MIR613-201ENST00000385248 95 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 AL034345.1-201ENST00000407768 123 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 STAG3L5P-204ENST00000443759 179 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 SNORD13-201ENST00000459299 104 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 AC055731.1-201ENST00000474387 401 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 RNU6-346P-201ENST00000516288 111 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 SNORD116-25-201ENST00000516517 92 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 RNU6-365P-201ENST00000517113 106 ntBASIC2.27□□□□□ -2.05
RTF1Q92541 MIR502-201ENST00000606349 86 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms