Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNA5SP482-201ENST00000391269 118 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 MIR1283-2-201ENST00000408621 87 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 Y_RNA.617-201ENST00000410920 90 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 Y_RNA.651-201ENST00000459380 103 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 AC069114.2-201ENST00000604699 304 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 AC006441.5-201ENST00000612680 209 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 MIR8054-201ENST00000620877 86 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 MIR376A2-201ENST00000636782 80 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 MTND5P32-201ENST00000560711 1802 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPEB3Q8NE35 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPEB3Q8NE35 AC131280.1-202ENST00000624067 4211 ntBASIC2.11□□□□□ -2.07
CPEB3Q8NE35 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
CPEB3Q8NE35 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CPEB3Q8NE35 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 RNU6-1056P-201ENST00000383996 107 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 SNORA40.5-201ENST00000391061 128 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.1□□□□□ -2.07
CPEB3Q8NE35 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.1□□□□□ -2.07
CPEB3Q8NE35 AL035461.1-201ENST00000421490 332 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 AF228730.3-201ENST00000436691 102 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 SNORA31.10-201ENST00000516482 106 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 RNU6-919P-201ENST00000516731 104 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 AL022345.2-201ENST00000606307 135 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 SNORD14A-201ENST00000606526 91 ntBASIC2.1□□□□□ -2.07
CPEB3Q8NE35 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CPEB3Q8NE35 AC007336.1-201ENST00000576365 3828 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPEB3Q8NE35 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CPEB3Q8NE35 SNORD14E-201ENST00000364009 85 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNU6-268P-201ENST00000364174 107 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNU6-1019P-201ENST00000364424 107 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNU6-442P-201ENST00000383968 104 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNU6-44P-201ENST00000384045 107 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNU6-429P-201ENST00000384582 108 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNU6-440P-201ENST00000390882 105 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 MIR548O-201ENST00000408583 114 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNU6-1064P-201ENST00000410626 104 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNA5SP508-201ENST00000411327 119 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 Y_RNA.630-201ENST00000411370 108 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 AC026436.1-201ENST00000510537 270 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 SNORD45.4-201ENST00000516629 73 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 RNU7-28P-201ENST00000516759 62 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 SCARNA15-202ENST00000516881 127 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 MIR5094-201ENST00000578766 85 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.09□□□□□ -2.07
CPEB3Q8NE35 AP006437.1-201ENST00000641440 3685 ntBASIC2.09□□□□□ -2.08
CPEB3Q8NE35 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.08
CPEB3Q8NE35 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.08
CPEB3Q8NE35 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CPEB3Q8NE35 MIR21-201ENST00000362134 72 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 RNU6-1084P-201ENST00000362498 107 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 RNU6-647P-201ENST00000364243 107 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 Y_RNA.265-201ENST00000364677 108 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 snoU2-30.1-201ENST00000365012 70 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 SNORD58C-201ENST00000365223 64 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 RNU6-476P-201ENST00000384726 107 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 MIR802-201ENST00000390235 94 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 RNU11-3P-201ENST00000391111 133 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 RNA5SP270-201ENST00000411361 118 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 MTATP6P21-201ENST00000440681 189 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.08□□□□□ -2.08
CPEB3Q8NE35 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.08□□□□□ -2.08
CPEB3Q8NE35 RNU5E-3P-201ENST00000515913 68 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 RNU7-25P-201ENST00000516544 62 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 AC133485.4-201ENST00000561835 220 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 AC138907.4-201ENST00000570107 226 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 SNORD53-201ENST00000579969 78 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 AC067747.1-201ENST00000608026 250 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 AC046143.2-201ENST00000609789 160 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 MIR1291-201ENST00000627649 87 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.08□□□□□ -2.08
CPEB3Q8NE35 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CPEB3Q8NE35 AC016717.2-201ENST00000609089 5141 ntBASIC2.08□□□□□ -2.08
CPEB3Q8NE35 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CPEB3Q8NE35 MIR449A-201ENST00000362113 91 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 MIRLET7C-201ENST00000362160 84 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 RNU4-82P-201ENST00000362443 140 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 RNU6-1144P-201ENST00000384247 104 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 MIR518A2-201ENST00000384966 87 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 HMGN2P3-201ENST00000433603 273 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 HMGN2P5-201ENST00000436882 273 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 STAG3L5P-204ENST00000443759 179 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 AC234781.5-201ENST00000508429 271 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 RNU6-781P-201ENST00000516377 101 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 RNU6-1061P-201ENST00000516530 99 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 RNU6-1149P-201ENST00000516810 97 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 MIR5197-201ENST00000583721 112 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 AC108081.1-201ENST00000604358 221 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 MIR6129-201ENST00000616087 109 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 U6.95-201ENST00000636931 70 ntBASIC2.07□□□□□ -2.08
CPEB3Q8NE35 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CPEB3Q8NE35 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CPEB3Q8NE35 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CPEB3Q8NE35 SNORA3A-201ENST00000364113 130 ntBASIC2.06□□□□□ -2.08
CPEB3Q8NE35 SNORA63D-201ENST00000364359 132 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms