Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNU6-970P-201ENST00000516312 107 ntBASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 AC090142.3-201ENST00000519012 385 ntBASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 AL049861.1-201ENST00000603130 150 ntBASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 AP001485.1-201ENST00000604799 199 ntBASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PPP4R4Q6NUP7 MIR583-201ENST00000384846 75 ntBASIC1.78□□□□□ -2.12
PPP4R4Q6NUP7 RNU6-381P-201ENST00000391259 108 ntBASIC1.78□□□□□ -2.12
PPP4R4Q6NUP7 RNY3P16-201ENST00000516338 101 ntBASIC1.78□□□□□ -2.12
PPP4R4Q6NUP7 AC090049.2-201ENST00000550377 109 ntBASIC1.78□□□□□ -2.12
PPP4R4Q6NUP7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.78□□□□□ -2.12
PPP4R4Q6NUP7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
PPP4R4Q6NUP7 uc_338.4-201ENST00000616635 176 ntBASIC1.78□□□□□ -2.12
PPP4R4Q6NUP7 ZNF355P-201ENST00000427301 3216 ntBASIC1.78□□□□□ -2.12
PPP4R4Q6NUP7 SNORA20.1-201ENST00000364790 130 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 SNORA2.2-201ENST00000365473 135 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-482P-201ENST00000391068 107 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 AL445646.1-201ENST00000431784 216 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 HMGN2P32-201ENST00000444648 269 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 SNORD77.4-201ENST00000516158 81 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-922P-201ENST00000516753 99 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-453P-201ENST00000516819 85 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.714-201ENST00000517065 90 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-165P-201ENST00000517170 99 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 AC015712.3-201ENST00000559380 164 ntBASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PPP4R4Q6NUP7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-268P-201ENST00000364174 107 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-1138P-201ENST00000365359 106 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 MIR516B2-201ENST00000385190 85 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 MT-TG-201ENST00000387429 68 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 MT-TT-201ENST00000387460 66 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 AL591806.2-201ENST00000433122 173 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 RNU4-71P-201ENST00000516258 113 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 RNU7-149P-201ENST00000516739 59 ntBASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
PPP4R4Q6NUP7 SNORD14E-201ENST00000364009 85 ntBASIC1.75□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.401-201ENST00000383965 117 ntBASIC1.75□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-997P-201ENST00000384725 107 ntBASIC1.75□□□□□ -2.13
PPP4R4Q6NUP7 MIR452-201ENST00000385020 85 ntBASIC1.75□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.626-201ENST00000411288 95 ntBASIC1.75□□□□□ -2.13
PPP4R4Q6NUP7 AC015922.2-201ENST00000435593 184 ntBASIC1.75□□□□□ -2.13
PPP4R4Q6NUP7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-379P-201ENST00000363813 104 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.188-201ENST00000363952 111 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.262-201ENST00000364641 102 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 SNORD26-201ENST00000384147 75 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.618-201ENST00000410949 107 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 COX6CP14-201ENST00000469580 174 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-1271P-201ENST00000517049 105 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-548P-201ENST00000517083 115 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 CYP3A52P-201ENST00000563326 91 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 FAM106DP-201ENST00000586416 501 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 AC006441.5-201ENST00000612680 209 ntBASIC1.74□□□□□ -2.13
PPP4R4Q6NUP7 RNU4-17P-201ENST00000365598 141 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-442P-201ENST00000383968 104 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 MIR616-201ENST00000385293 97 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.587-201ENST00000391210 103 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 AC003989.2-201ENST00000440224 169 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 RNU1-98P-201ENST00000458992 160 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 MIR4308-201ENST00000580634 81 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 AC009779.6-201ENST00000603972 165 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 AL391903.3-201ENST00000612158 163 ntBASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PPP4R4Q6NUP7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-484P-201ENST00000384016 107 ntBASIC1.72□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.486-201ENST00000384398 107 ntBASIC1.72□□□□□ -2.13
PPP4R4Q6NUP7 RNU6-322P-201ENST00000516010 103 ntBASIC1.72□□□□□ -2.13
PPP4R4Q6NUP7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.72□□□□□ -2.13
PPP4R4Q6NUP7 Y_RNA.308-201ENST00000365043 101 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 AL451046.2-201ENST00000403074 277 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 RNU2-2P-201ENST00000410396 191 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 RN7SKP88-201ENST00000516847 250 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 AC110588.1-201ENST00000559699 137 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 7SK.8-201ENST00000612110 250 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 7SK.11-201ENST00000615477 250 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 7SK.13-201ENST00000622040 250 ntBASIC1.71□□□□□ -2.14
PPP4R4Q6NUP7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PPP4R4Q6NUP7 Y_RNA.489-201ENST00000384410 101 ntBASIC1.7□□□□□ -2.14
PPP4R4Q6NUP7 RNU6-493P-201ENST00000391321 108 ntBASIC1.7□□□□□ -2.14
PPP4R4Q6NUP7 RNU6-955P-201ENST00000410497 104 ntBASIC1.7□□□□□ -2.14
PPP4R4Q6NUP7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.7□□□□□ -2.14
PPP4R4Q6NUP7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.7□□□□□ -2.14
PPP4R4Q6NUP7 RN7SKP164-201ENST00000516138 266 ntBASIC1.7□□□□□ -2.14
PPP4R4Q6NUP7 RNU6-561P-201ENST00000516222 102 ntBASIC1.7□□□□□ -2.14
PPP4R4Q6NUP7 RNU6-295P-201ENST00000516901 104 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms