Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC010655.3-201ENST00000478818 450 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 SEPT14P8-201ENST00000508026 178 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 RNU6-830P-201ENST00000516353 107 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 RPL23AP91-201ENST00000569211 455 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 SNORD113-5-201ENST00000607261 78 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 AC108706.1-201ENST00000611053 297 ntBASIC0.62□□□□□ -2.31
RAB40BQ12829 RNU6-654P-201ENST00000364373 107 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 Y_RNA.286-201ENST00000364813 102 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 SNORA72.4-201ENST00000384174 132 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 RNU6-1067P-201ENST00000384752 107 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 MIR570-201ENST00000384917 97 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 SNORD99-201ENST00000408612 74 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 MIR1302-7-201ENST00000408841 72 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.61□□□□□ -2.31
RAB40BQ12829 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.61□□□□□ -2.31
RAB40BQ12829 RPS29P1-201ENST00000465274 159 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 RNU6-475P-201ENST00000516073 104 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 RNU6-1110P-201ENST00000516462 101 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 AC025627.3-201ENST00000582078 182 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 AC005357.1-201ENST00000588399 301 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 PART1_1.1-201ENST00000611761 217 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 AC015726.2-201ENST00000620112 122 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 MIR6516-201ENST00000630554 81 ntBASIC0.61□□□□□ -2.31
RAB40BQ12829 RNU6-674P-201ENST00000363831 107 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 Y_RNA.197-201ENST00000364004 102 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 SNORD113.3-201ENST00000364630 78 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 Y_RNA.813-201ENST00000364639 102 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 SNORA2B-201ENST00000384583 137 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 U8.17-201ENST00000391292 132 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 MTCO2P33-201ENST00000402100 465 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 RNU2-14P-201ENST00000411053 191 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 RNU6-130P-201ENST00000411112 103 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 MTND3P22-201ENST00000510932 243 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 RNA5SP220-201ENST00000516298 104 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 RNU6-1007P-201ENST00000516586 107 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 MIR2115-201ENST00000516657 100 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 MIR4801-201ENST00000582704 82 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 AC012433.1-201ENST00000588916 398 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 AL136317.1-201ENST00000612653 226 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 AC007485.1-201ENST00000616755 206 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 MIR6788-201ENST00000618842 66 ntBASIC0.6□□□□□ -2.31
RAB40BQ12829 Y_RNA.116-201ENST00000363292 103 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 Y_RNA.242-201ENST00000364473 110 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 SNORA51.10-201ENST00000384418 136 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 RNU6-110P-201ENST00000384508 104 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 MIR518E-201ENST00000385252 88 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 SNORD72-201ENST00000390994 80 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 RNA5SP95-201ENST00000410319 137 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.59□□□□□ -2.31
RAB40BQ12829 RNU7-181P-201ENST00000517234 74 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 CYP3A137P-201ENST00000562436 69 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 MIR4795-201ENST00000584182 89 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 AL078603.1-201ENST00000603824 313 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 AC104695.3-201ENST00000604052 296 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 Y_RNA.804-201ENST00000615262 101 ntBASIC0.59□□□□□ -2.31
RAB40BQ12829 RNU4-73P-201ENST00000363164 141 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 RNU6-801P-201ENST00000364087 105 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 Y_RNA.424-201ENST00000384063 103 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 SNORA26.5-201ENST00000391215 123 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 MIR1302-11-201ENST00000408051 138 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 MIR1302-9-201ENST00000408365 138 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 MIR1302-10-201ENST00000408734 138 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 RNU6-613P-201ENST00000410412 108 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 SNORD11-201ENST00000459124 84 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 COX6CP6-201ENST00000490840 228 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 RNU6-1046P-201ENST00000516538 107 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
RAB40BQ12829 MIR151B-201ENST00000584249 96 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 MIR1302-2-201ENST00000607096 138 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 MIR6835-201ENST00000621552 64 ntBASIC0.58□□□□□ -2.32
RAB40BQ12829 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.57□□□□□ -2.32
RAB40BQ12829 Y_RNA.112-201ENST00000363250 102 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 SNORA1.2-201ENST00000365189 134 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 AL603910.2-201ENST00000407268 136 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.57□□□□□ -2.32
RAB40BQ12829 SCARNA8-201ENST00000515924 131 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 RNU6-1170P-201ENST00000515974 106 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 RNU6-191P-201ENST00000516295 94 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.57□□□□□ -2.32
RAB40BQ12829 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.57□□□□□ -2.32
RAB40BQ12829 MIR4300-201ENST00000581016 96 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 AC006441.5-201ENST00000612680 209 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 MIR376A1-201ENST00000616574 68 ntBASIC0.57□□□□□ -2.32
RAB40BQ12829 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.57□□□□□ -2.32
RAB40BQ12829 SNORD113-8-201ENST00000363497 74 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 RNU6-899P-201ENST00000363947 107 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 RNU6-396P-201ENST00000365369 105 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 RNU6-42P-201ENST00000384165 107 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 Y_RNA.537-201ENST00000384626 109 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
RAB40BQ12829 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 MIR548J-201ENST00000408833 112 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 RNU6-1223P-201ENST00000517124 104 ntBASIC0.56□□□□□ -2.32
RAB40BQ12829 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.56□□□□□ -2.32
RAB40BQ12829 AC133485.1-201ENST00000567176 124 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 190.4 ms