Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 RNU6-856P-201ENST00000516959 98 ntBASIC1.94□□□□□ -2.1
C4orf47A7E2U8 MIR378D2-201ENST00000580636 98 ntBASIC1.94□□□□□ -2.1
C4orf47A7E2U8 MIR4438-201ENST00000585271 93 ntBASIC1.94□□□□□ -2.1
C4orf47A7E2U8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
C4orf47A7E2U8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
C4orf47A7E2U8 RNU6-661P-201ENST00000362409 107 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 RNU6-1164P-201ENST00000364428 107 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 RNU6-597P-201ENST00000365620 102 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 RNU6-484P-201ENST00000384016 107 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 SNORA75.5-201ENST00000391291 81 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 RNU4-62P-201ENST00000410125 130 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.93□□□□□ -2.1
C4orf47A7E2U8 AL353689.1-201ENST00000438895 199 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.93□□□□□ -2.1
C4orf47A7E2U8 AC011603.4-201ENST00000611325 277 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 TUG1_4.1-201ENST00000619464 181 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 AP001340.1-201ENST00000624405 217 ntBASIC1.93□□□□□ -2.1
C4orf47A7E2U8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
C4orf47A7E2U8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
C4orf47A7E2U8 Y_RNA.116-201ENST00000363292 103 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 RNU6-978P-201ENST00000364371 103 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 SNORD114-6-201ENST00000364393 72 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 Y_RNA.353-201ENST00000365440 108 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 RNU6-80P-201ENST00000384195 107 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 AP1B1P2-201ENST00000416196 106 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 AC060773.1-201ENST00000421698 310 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 AC010154.1-201ENST00000425857 269 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 MRPS17P9-201ENST00000511924 393 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 Y_RNA.686-201ENST00000516548 134 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 RNU6-197P-201ENST00000516680 100 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 RNU2-56P-201ENST00000516826 190 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 RNU7-172P-201ENST00000517125 64 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 AP001328.1-201ENST00000528550 176 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
C4orf47A7E2U8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.92□□□□□ -2.1
C4orf47A7E2U8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
C4orf47A7E2U8 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 Y_RNA.203-201ENST00000364106 102 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 Y_RNA.273-201ENST00000364703 102 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 RNU6-215P-201ENST00000365169 102 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 RNU6-160P-201ENST00000384591 107 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 MIR518A2-201ENST00000384966 87 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 MIR29C-201ENST00000385231 88 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 SNORA79-201ENST00000408376 140 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 RNU2-55P-201ENST00000411146 174 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
C4orf47A7E2U8 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 RNU1-131P-201ENST00000458943 161 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 RNU4-57P-201ENST00000515980 135 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 RPL23AP91-201ENST00000569211 455 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 AL359881.1-201ENST00000602916 267 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
C4orf47A7E2U8 uc_338.4-201ENST00000616635 176 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 U6.73-201ENST00000619194 103 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.91□□□□□ -2.1
C4orf47A7E2U8 AP000553.5-201ENST00000641933 54 ntBASIC1.91□□□□□ -2.1
C4orf47A7E2U8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
C4orf47A7E2U8 WWP1P1-201ENST00000466609 2769 ntBASIC1.9□□□□□ -2.1
C4orf47A7E2U8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 RNU6-915P-201ENST00000364943 103 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 Y_RNA.432-201ENST00000384087 111 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 Y_RNA.525-201ENST00000384570 113 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.9□□□□□ -2.11
C4orf47A7E2U8 SNORD11-201ENST00000459124 84 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 SNORD77.4-201ENST00000516158 81 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 RNU6-1299P-201ENST00000516316 100 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 RNU6-659P-201ENST00000516454 104 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 AC011604.1-201ENST00000545978 196 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 AL160236.1-201ENST00000556317 195 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 MIR3683-201ENST00000580847 82 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 U7.2-201ENST00000607576 63 ntBASIC1.9□□□□□ -2.11
C4orf47A7E2U8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.9□□□□□ -2.11
C4orf47A7E2U8 RNU6-1209P-201ENST00000363655 107 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 RNU1-96P-201ENST00000364163 162 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 RNU4-52P-201ENST00000384209 138 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 MIR1253-201ENST00000408273 105 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 MIR1283-2-201ENST00000408621 87 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 AL158823.1-201ENST00000418441 478 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 AC245047.4-201ENST00000433189 144 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 RPL23AP6-201ENST00000446637 472 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 AL021397.1-201ENST00000451806 248 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.89□□□□□ -2.11
C4orf47A7E2U8 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 RNU7-107P-201ENST00000459121 61 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 AC079804.2-201ENST00000490376 200 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 AC011406.1-201ENST00000512440 370 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 MIR8081-201ENST00000611533 95 ntBASIC1.89□□□□□ -2.11
C4orf47A7E2U8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
C4orf47A7E2U8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
C4orf47A7E2U8 Y_RNA.634-201ENST00000364811 113 ntBASIC1.88□□□□□ -2.11
C4orf47A7E2U8 RNU6-1080P-201ENST00000383982 107 ntBASIC1.88□□□□□ -2.11
C4orf47A7E2U8 MIR562-201ENST00000384894 95 ntBASIC1.88□□□□□ -2.11
C4orf47A7E2U8 Y_RNA.584-201ENST00000391090 114 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms