Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 RNU6-949P-201ENST00000384040 107 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 RNU6-291P-201ENST00000384720 107 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 MTCO2P3-201ENST00000442543 421 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 AP002371.2-201ENST00000624450 503 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 RNU6-621P-201ENST00000364752 109 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 RNU7-55P-201ENST00000459426 62 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 MIR3684-201ENST00000579779 74 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 AL662814.1-201ENST00000617364 121 ntBASIC-1.77□□□□□ -2.69
RGPD3A6NKT7 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.78□□□□□ -2.69
RGPD3A6NKT7 RNU6-268P-201ENST00000364174 107 ntBASIC-1.78□□□□□ -2.69
RGPD3A6NKT7 MIR539-201ENST00000365690 78 ntBASIC-1.78□□□□□ -2.69
RGPD3A6NKT7 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.78□□□□□ -2.69
RGPD3A6NKT7 MIR558-201ENST00000384920 94 ntBASIC-1.78□□□□□ -2.69
RGPD3A6NKT7 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.78□□□□□ -2.69
RGPD3A6NKT7 AL008987.1-201ENST00000415528 237 ntBASIC-1.78□□□□□ -2.69
RGPD3A6NKT7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.78□□□□□ -2.69
RGPD3A6NKT7 SNORD56.2-201ENST00000363242 71 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 RNU2-8P-201ENST00000410727 190 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 MTATP6P18-201ENST00000417994 673 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 AC018710.1-201ENST00000506509 158 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 AC022616.4-201ENST00000522985 181 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 AC009248.2-201ENST00000619826 254 ntBASIC-1.79□□□□□ -2.7
RGPD3A6NKT7 SNORA63.5-201ENST00000363548 123 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 MIR147A-201ENST00000385079 72 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 SNORA40.5-201ENST00000391061 128 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 RNU6-685P-201ENST00000517088 95 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 RNA5SP484-201ENST00000458857 111 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 U8.19-201ENST00000459095 133 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 U8.22-201ENST00000459141 133 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 SNORA25.16-201ENST00000516741 121 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 MIR4473-201ENST00000583731 91 ntBASIC-1.8□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.81□□□□□ -2.7
RGPD3A6NKT7 RNU1-141P-201ENST00000364623 158 ntBASIC-1.81□□□□□ -2.7
RGPD3A6NKT7 AC022028.1-201ENST00000412054 408 ntBASIC-1.81□□□□□ -2.7
RGPD3A6NKT7 AC098614.3-201ENST00000438957 440 ntBASIC-1.81□□□□□ -2.7
RGPD3A6NKT7 YWHAEP2-201ENST00000580066 112 ntBASIC-1.81□□□□□ -2.7
RGPD3A6NKT7 POLR3GP2-201ENST00000588366 668 ntBASIC-1.81□□□□□ -2.7
RGPD3A6NKT7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 MTND3P9-201ENST00000429526 346 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 MTND1P12-201ENST00000455231 147 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 RPL39P5-202ENST00000512505 151 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 RNU6-983P-201ENST00000516004 103 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 AC091144.1-201ENST00000519573 138 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 AP001282.2-201ENST00000616149 309 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 U6.115-201ENST00000636045 103 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 RNU6-723P-201ENST00000383973 107 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 RNU6-434P-201ENST00000384376 107 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 RNU7-74P-201ENST00000459104 62 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 AC024405.2-202ENST00000532731 184 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 AL353803.5-201ENST00000599815 141 ntBASIC-1.82□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.83□□□□□ -2.7
RGPD3A6NKT7 RNA5SP475-201ENST00000410568 110 ntBASIC-1.83□□□□□ -2.7
RGPD3A6NKT7 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.83□□□□□ -2.7
RGPD3A6NKT7 MTND1P27-201ENST00000451117 902 ntBASIC-1.83□□□□□ -2.7
RGPD3A6NKT7 UBL5P4-201ENST00000562584 236 ntBASIC-1.83□□□□□ -2.7
RGPD3A6NKT7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.83□□□□□ -2.7
RGPD3A6NKT7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.83□□□□□ -2.7
RGPD3A6NKT7 AL158209.2-201ENST00000619266 216 ntBASIC-1.83□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 RNY4P7-201ENST00000364600 96 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 MTND2P18-201ENST00000419962 1030 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 AC022418.1-201ENST00000624118 445 ntBASIC-1.84□□□□□ -2.7
RGPD3A6NKT7 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.85□□□□□ -2.7
RGPD3A6NKT7 SNORD73A-201ENST00000386062 65 ntBASIC-1.85□□□□□ -2.7
RGPD3A6NKT7 RNA5SP237-201ENST00000410414 113 ntBASIC-1.85□□□□□ -2.7
RGPD3A6NKT7 MIR4520-1-201ENST00000582609 70 ntBASIC-1.85□□□□□ -2.7
RGPD3A6NKT7 RNU6-641P-201ENST00000384006 107 ntBASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 RNU6-769P-201ENST00000384407 104 ntBASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 SNORA72.6-201ENST00000384520 129 ntBASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 MIR1284-201ENST00000408337 120 ntBASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 RNU7-104P-201ENST00000459398 79 ntBASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 RNU6-531P-201ENST00000516694 104 ntBASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 RNU6-410P-201ENST00000517006 107 ntBASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 YWHAEP3-201ENST00000582767 121 ntBASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
RGPD3A6NKT7 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.86□□□□□ -2.71
RGPD3A6NKT7 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms