Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNRPGP13-201ENST00000442212 177 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.48□□□□□ -2.17
SIX2Q9NPC8 AC099513.1-201ENST00000490423 301 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 OR9P1P-201ENST00000496431 281 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 RNU6-548P-201ENST00000517083 115 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SIX2Q9NPC8 AC009779.6-201ENST00000603972 165 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 SNORA28-201ENST00000606769 126 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 AL591926.4-201ENST00000616895 298 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 AC141273.2-201ENST00000618989 130 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 AL365265.1-201ENST00000621045 234 ntBASIC1.48□□□□□ -2.17
SIX2Q9NPC8 MIR367-201ENST00000362299 68 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 RNU6-661P-201ENST00000362409 107 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 RNU6-653P-201ENST00000363074 106 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 Y_RNA.796-201ENST00000364268 102 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 RNU4-10P-201ENST00000364383 140 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 Y_RNA.799-201ENST00000364992 102 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 RNU6-439P-201ENST00000384188 106 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 SNORA8.3-201ENST00000384679 139 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 MIR526A2-201ENST00000390198 65 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 AL034345.1-201ENST00000407768 123 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 RNU6-383P-201ENST00000410864 94 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 Y_RNA.626-201ENST00000411288 95 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.47□□□□□ -2.17
SIX2Q9NPC8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.47□□□□□ -2.17
SIX2Q9NPC8 COX6CP14-201ENST00000469580 174 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 HMGN1P7-201ENST00000491722 313 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 MRPS17P9-201ENST00000511924 393 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 MIR4724-201ENST00000579485 89 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 AC021506.2-201ENST00000612354 169 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 Y_RNA.802-201ENST00000614892 130 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
SIX2Q9NPC8 Y_RNA.262-201ENST00000364641 102 ntBASIC1.46□□□□□ -2.18
SIX2Q9NPC8 RNU6-969P-201ENST00000383900 105 ntBASIC1.46□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.552-201ENST00000384665 112 ntBASIC1.46□□□□□ -2.18
SIX2Q9NPC8 MIR1278-201ENST00000408753 81 ntBASIC1.46□□□□□ -2.18
SIX2Q9NPC8 MIR1298-201ENST00000408783 112 ntBASIC1.46□□□□□ -2.18
SIX2Q9NPC8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.46□□□□□ -2.18
SIX2Q9NPC8 MIR5688-201ENST00000580619 83 ntBASIC1.46□□□□□ -2.18
SIX2Q9NPC8 MIR2681-201ENST00000581814 105 ntBASIC1.46□□□□□ -2.18
SIX2Q9NPC8 AC103810.8-201ENST00000607347 118 ntBASIC1.46□□□□□ -2.18
SIX2Q9NPC8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SIX2Q9NPC8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.46□□□□□ -2.18
SIX2Q9NPC8 MIR126-201ENST00000362291 85 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 RNU6-1209P-201ENST00000363655 107 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 U8.5-201ENST00000364528 136 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 MIR626-201ENST00000385032 94 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 FTH1P12-201ENST00000432137 551 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 SNRPGP10-201ENST00000432323 225 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
SIX2Q9NPC8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.45□□□□□ -2.18
SIX2Q9NPC8 RPL23AP91-201ENST00000569211 455 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 AC130289.1-201ENST00000577321 73 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 MIR3671-201ENST00000580455 88 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 MIR4762-201ENST00000585261 75 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 AL021707.8-201ENST00000609428 183 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 JPX_2.1-201ENST00000614161 69 ntBASIC1.45□□□□□ -2.18
SIX2Q9NPC8 MIRLET7C-201ENST00000362160 84 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.24-201ENST00000362508 103 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 SNORD68-201ENST00000363214 84 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.200-201ENST00000364018 102 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.257-201ENST00000364596 102 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 RNU6-203P-201ENST00000384038 104 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 RNU6-424P-201ENST00000384367 105 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.515-201ENST00000384535 112 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.572-201ENST00000384757 98 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 MIR522-201ENST00000385071 87 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 SNORD11-201ENST00000459124 84 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 AC004223.1-201ENST00000479840 271 ntBASIC1.44□□□□□ -2.18
SIX2Q9NPC8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SIX2Q9NPC8 MIR411-201ENST00000362239 96 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 RNU6-414P-201ENST00000363705 104 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.199-201ENST00000364014 102 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 RNU4-17P-201ENST00000365598 141 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 MIR194-1-201ENST00000384892 85 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 RNU6-847P-201ENST00000411115 108 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 AL161935.2-201ENST00000414627 60 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 CALM2P4-201ENST00000430810 426 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.43□□□□□ -2.18
SIX2Q9NPC8 JTBP1-201ENST00000441314 247 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 RNY3P16-201ENST00000516338 101 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.43□□□□□ -2.18
SIX2Q9NPC8 AL513423.1-201ENST00000621695 132 ntBASIC1.43□□□□□ -2.18
SIX2Q9NPC8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SIX2Q9NPC8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SIX2Q9NPC8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SIX2Q9NPC8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.83-201ENST00000363005 113 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 snoU2_19.4-201ENST00000364329 80 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.229-201ENST00000364347 113 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.274-201ENST00000364714 101 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 Y_RNA.308-201ENST00000365043 101 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SIX2Q9NPC8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SIX2Q9NPC8 RNU6-131P-201ENST00000391144 107 ntBASIC1.42□□□□□ -2.18
SIX2Q9NPC8 RNA5SP496-201ENST00000391240 109 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms