Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.56□□□□□ -2.5
LIMD2Q9BT23 AC010424.1-201ENST00000506336 297 ntBASIC-0.56□□□□□ -2.5
LIMD2Q9BT23 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.56□□□□□ -2.5
LIMD2Q9BT23 AL354950.2-201ENST00000617939 290 ntBASIC-0.56□□□□□ -2.5
LIMD2Q9BT23 AC023510.2-201ENST00000622162 746 ntBASIC-0.56□□□□□ -2.5
LIMD2Q9BT23 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 RNU6-268P-201ENST00000364174 107 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 RNU4-28P-201ENST00000364739 141 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 RNU6-442P-201ENST00000383968 104 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 SNORA72-201ENST00000384339 132 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 RNU6-790P-201ENST00000384479 105 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 SNORD38B-201ENST00000384690 67 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 SNORD28-201ENST00000384706 75 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 MT-TF-201ENST00000387314 71 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 FCF1P9-201ENST00000412546 282 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 MCFD2P1-201ENST00000417812 300 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 MTND3P23-201ENST00000431980 347 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 AC109327.2-201ENST00000448339 378 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 snoU13.2-201ENST00000459201 104 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 RNA5SP169-201ENST00000517268 117 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 MIR3913-1-201ENST00000577744 102 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 MIR3925-201ENST00000584674 77 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 MIR8066-201ENST00000617280 78 ntBASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.57□□□□□ -2.5
LIMD2Q9BT23 AC106754.1-201ENST00000562632 1513 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 SNORD115-41-201ENST00000363608 82 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 RNY3P5-201ENST00000384127 102 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 MIR588-201ENST00000384900 83 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 MT-TQ-201ENST00000387372 72 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 RNU6-855P-201ENST00000410395 104 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 USMG5P1-201ENST00000425964 177 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 MTATP6P26-201ENST00000445926 662 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 RNU7-181P-201ENST00000517234 74 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 IGKV1-22-201ENST00000524313 326 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 MIR5706-201ENST00000579841 80 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 MIR4639-201ENST00000584938 69 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 AC125232.2-201ENST00000592457 143 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 AC092954.2-201ENST00000609103 430 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 MIR8055-201ENST00000610739 97 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 AC107308.1-201ENST00000615897 301 ntBASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.58□□□□□ -2.5
LIMD2Q9BT23 MIR30D-201ENST00000362283 70 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 SNORD115-30-201ENST00000364117 82 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 SNORA25.7-201ENST00000364375 127 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 MIR501-201ENST00000390204 84 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 AC244250.2-201ENST00000418731 148 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 USP9YP16-201ENST00000430287 407 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 USP9YP23-201ENST00000455085 407 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 PRDX4P1-201ENST00000507189 574 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 ACA59.1-201ENST00000515966 143 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 RNU6-504P-201ENST00000516568 104 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 MRPS36P3-201ENST00000519284 130 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 Z97988.1-201ENST00000637697 135 ntBASIC-0.59□□□□□ -2.5
LIMD2Q9BT23 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 RNU6-596P-201ENST00000365395 98 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 MIR196A1-201ENST00000388006 70 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 SCARNA17-201ENST00000516183 144 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 SCARNA1-201ENST00000517138 166 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 RNU2-60P-201ENST00000517290 128 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 CR383656.4-201ENST00000546909 122 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 AC090616.2-202ENST00000584248 222 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 AC005972.2-201ENST00000604690 348 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 AC092807.2-201ENST00000609367 243 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 AC109347.2-201ENST00000610220 349 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 ZNF299P-201ENST00000406845 1804 ntBASIC-0.6□□□□□ -2.51
LIMD2Q9BT23 RNU6-595P-201ENST00000363944 107 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 SNORD95.1-201ENST00000364099 68 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 RNA5SP205-201ENST00000364653 136 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 RNU6-811P-201ENST00000384069 107 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 MIR215-201ENST00000384858 110 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 SNORA3B-201ENST00000391305 131 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 MTCO3P40-201ENST00000392516 676 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 MTND2P18-201ENST00000419962 1030 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 MTATP6P23-201ENST00000440153 476 ntBASIC-0.61□□□□□ -2.51
LIMD2Q9BT23 AL138752.1-201ENST00000452964 351 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 347.4 ms