Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 snoU13.18-201ENST00000459483 104 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
PRPF39Q86UA1 UBL5P1-201ENST00000507979 193 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 AC127455.1-201ENST00000565496 145 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
PRPF39Q86UA1 MIR3192-201ENST00000584920 77 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 AC124312.5-201ENST00000604451 268 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 AL391903.3-201ENST00000612158 163 ntBASIC1.1□□□□□ -2.23
PRPF39Q86UA1 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
PRPF39Q86UA1 RNU6-42P-201ENST00000384165 107 ntBASIC1.09□□□□□ -2.23
PRPF39Q86UA1 SNORD38C-201ENST00000384381 69 ntBASIC1.09□□□□□ -2.23
PRPF39Q86UA1 RNU6-308P-201ENST00000390957 107 ntBASIC1.09□□□□□ -2.23
PRPF39Q86UA1 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
PRPF39Q86UA1 RNU7-90P-201ENST00000459216 62 ntBASIC1.09□□□□□ -2.23
PRPF39Q86UA1 LARP7P1-201ENST00000605576 316 ntBASIC1.09□□□□□ -2.23
PRPF39Q86UA1 MIR103A2-201ENST00000362154 78 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 RNU4-80P-201ENST00000363200 141 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.813-201ENST00000364639 102 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 SNORD114-24-201ENST00000365029 72 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 MTND4P19-201ENST00000446659 478 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.08□□□□□ -2.24
PRPF39Q86UA1 SNORD124-201ENST00000459577 104 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 RNU6-397P-201ENST00000516226 104 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 MIR2681-201ENST00000581814 105 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 MIR4661-201ENST00000582720 75 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 AC087685.1-201ENST00000587507 141 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 PART1_1.1-201ENST00000611761 217 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 MIR376A1-201ENST00000616574 68 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 MIR6734-201ENST00000621166 68 ntBASIC1.08□□□□□ -2.24
PRPF39Q86UA1 RNU6-442P-201ENST00000383968 104 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 MIR200A-201ENST00000384875 90 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 SNORA75.2-201ENST00000391138 150 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 SNORA75.3-201ENST00000391231 150 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 RNU6-130P-201ENST00000411112 103 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 RNU7-21P-201ENST00000459430 62 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 SNORD123-201ENST00000459473 70 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 RNU6-1046P-201ENST00000516538 107 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.07□□□□□ -2.24
PRPF39Q86UA1 MIR4764-201ENST00000580680 88 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 MIR7111-201ENST00000619751 72 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 AC090574.1-201ENST00000623186 233 ntBASIC1.07□□□□□ -2.24
PRPF39Q86UA1 RNA5SP264-201ENST00000363115 107 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 SNORA25.3-201ENST00000363205 127 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 SNORD113-8-201ENST00000363497 74 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.286-201ENST00000364813 102 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 SNORA63.7-201ENST00000365579 123 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.395-201ENST00000383945 109 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 RNU6-101P-201ENST00000410323 104 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.602-201ENST00000410535 92 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 RNU6-437P-201ENST00000459408 95 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 RNU6-1007P-201ENST00000516586 107 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 RNU6-113P-201ENST00000516653 101 ntBASIC1.06□□□□□ -2.24
PRPF39Q86UA1 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 RNA5SP48-201ENST00000363969 126 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 RNU6-1048P-201ENST00000364054 107 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 SNORA36B-201ENST00000410438 131 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 RNU7-141P-201ENST00000459304 62 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 RPS26P48-201ENST00000491713 339 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 PDCD5P2-201ENST00000507570 312 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 RNU7-41P-201ENST00000515917 61 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 AC136628.3-201ENST00000521868 290 ntBASIC1.05□□□□□ -2.24
PRPF39Q86UA1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PRPF39Q86UA1 RNU6-969P-201ENST00000383900 105 ntBASIC1.04□□□□□ -2.24
PRPF39Q86UA1 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.389-201ENST00000383924 113 ntBASIC1.04□□□□□ -2.24
PRPF39Q86UA1 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
PRPF39Q86UA1 AC010655.3-201ENST00000478818 450 ntBASIC1.04□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.715-201ENST00000517082 110 ntBASIC1.04□□□□□ -2.24
PRPF39Q86UA1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.04□□□□□ -2.24
PRPF39Q86UA1 RPL23AP91-201ENST00000569211 455 ntBASIC1.04□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.148-201ENST00000363557 117 ntBASIC1.03□□□□□ -2.24
PRPF39Q86UA1 RNU6-450P-201ENST00000364654 107 ntBASIC1.03□□□□□ -2.24
PRPF39Q86UA1 SNORD42.2-201ENST00000365570 69 ntBASIC1.03□□□□□ -2.24
PRPF39Q86UA1 SNORA72.4-201ENST00000384174 132 ntBASIC1.03□□□□□ -2.24
PRPF39Q86UA1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
PRPF39Q86UA1 snoU13.25-201ENST00000458945 104 ntBASIC1.03□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.639-201ENST00000458981 102 ntBASIC1.03□□□□□ -2.24
PRPF39Q86UA1 RNU6-988P-201ENST00000519081 107 ntBASIC1.03□□□□□ -2.24
PRPF39Q86UA1 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
PRPF39Q86UA1 Y_RNA.31-201ENST00000362574 102 ntBASIC1.02□□□□□ -2.25
PRPF39Q86UA1 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
PRPF39Q86UA1 MTCO2P33-201ENST00000402100 465 ntBASIC1.02□□□□□ -2.25
PRPF39Q86UA1 RPS29P1-201ENST00000465274 159 ntBASIC1.02□□□□□ -2.25
PRPF39Q86UA1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.02□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.721-201ENST00000517207 102 ntBASIC1.02□□□□□ -2.25
PRPF39Q86UA1 MIR4300-201ENST00000581016 96 ntBASIC1.02□□□□□ -2.25
PRPF39Q86UA1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.02□□□□□ -2.25
PRPF39Q86UA1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PRPF39Q86UA1 AC134026.1-201ENST00000623249 2239 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 RNU4-90P-201ENST00000362773 141 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 301.6 ms