Protein–RNA interactions for Protein: Q6P435

Putative uncharacterized SMG1-like protein, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q6P435 MIR4421-201ENST00000578133 69 ntBASIC1.05□□□□□ -2.24
Q6P435 AP000942.4-201ENST00000604811 241 ntBASIC1.05□□□□□ -2.24
Q6P435 BX284668.6-201ENST00000606899 438 ntBASIC1.05□□□□□ -2.24
Q6P435 AC021506.2-201ENST00000612354 169 ntBASIC1.05□□□□□ -2.24
Q6P435 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.05□□□□□ -2.24
Q6P435 AC095038.3-201ENST00000634439 195 ntBASIC1.05□□□□□ -2.24
Q6P435 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Q6P435 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Q6P435 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Q6P435 Y_RNA.65-201ENST00000362846 100 ntBASIC1.04□□□□□ -2.24
Q6P435 Y_RNA.188-201ENST00000363952 111 ntBASIC1.04□□□□□ -2.24
Q6P435 Y_RNA.203-201ENST00000364106 102 ntBASIC1.04□□□□□ -2.24
Q6P435 RNU4-10P-201ENST00000364383 140 ntBASIC1.04□□□□□ -2.24
Q6P435 Y_RNA.265-201ENST00000364677 108 ntBASIC1.04□□□□□ -2.24
Q6P435 SNORA20.1-201ENST00000364790 130 ntBASIC1.04□□□□□ -2.24
Q6P435 RNU6-338P-201ENST00000383888 105 ntBASIC1.04□□□□□ -2.24
Q6P435 Y_RNA.478-201ENST00000384358 107 ntBASIC1.04□□□□□ -2.24
Q6P435 RNU6-950P-201ENST00000384651 107 ntBASIC1.04□□□□□ -2.24
Q6P435 MIR1278-201ENST00000408753 81 ntBASIC1.04□□□□□ -2.24
Q6P435 COX6CP10-201ENST00000416832 224 ntBASIC1.04□□□□□ -2.24
Q6P435 RNU7-34P-201ENST00000459394 64 ntBASIC1.04□□□□□ -2.24
Q6P435 RNU6-437P-201ENST00000459408 95 ntBASIC1.04□□□□□ -2.24
Q6P435 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.04□□□□□ -2.24
Q6P435 OR9P1P-201ENST00000496431 281 ntBASIC1.04□□□□□ -2.24
Q6P435 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.04□□□□□ -2.24
Q6P435 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
Q6P435 RNU6-111P-201ENST00000517179 105 ntBASIC1.04□□□□□ -2.24
Q6P435 AC090821.2-201ENST00000523552 176 ntBASIC1.04□□□□□ -2.24
Q6P435 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.04□□□□□ -2.24
Q6P435 MIR4298-201ENST00000584380 73 ntBASIC1.04□□□□□ -2.24
Q6P435 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.04□□□□□ -2.24
Q6P435 AC011921.3-201ENST00000605540 361 ntBASIC1.04□□□□□ -2.24
Q6P435 AL512598.1-201ENST00000610158 273 ntBASIC1.04□□□□□ -2.24
Q6P435 AL591926.4-201ENST00000616895 298 ntBASIC1.04□□□□□ -2.24
Q6P435 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.04□□□□□ -2.24
Q6P435 RNU6-1205P-201ENST00000363625 106 ntBASIC1.03□□□□□ -2.24
Q6P435 RNU6-379P-201ENST00000363813 104 ntBASIC1.03□□□□□ -2.24
Q6P435 RNU6-674P-201ENST00000363831 107 ntBASIC1.03□□□□□ -2.24
Q6P435 Y_RNA.253-201ENST00000364562 112 ntBASIC1.03□□□□□ -2.24
Q6P435 Y_RNA.293-201ENST00000364908 93 ntBASIC1.03□□□□□ -2.24
Q6P435 RNU6-144P-201ENST00000383951 107 ntBASIC1.03□□□□□ -2.24
Q6P435 Y_RNA.572-201ENST00000384757 98 ntBASIC1.03□□□□□ -2.24
Q6P435 MIR30A-201ENST00000385092 71 ntBASIC1.03□□□□□ -2.24
Q6P435 MT-TG-201ENST00000387429 68 ntBASIC1.03□□□□□ -2.24
Q6P435 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.03□□□□□ -2.24
Q6P435 AL034345.1-201ENST00000407768 123 ntBASIC1.03□□□□□ -2.24
Q6P435 RNU6-383P-201ENST00000410864 94 ntBASIC1.03□□□□□ -2.24
Q6P435 Y_RNA.618-201ENST00000410949 107 ntBASIC1.03□□□□□ -2.24
Q6P435 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.03□□□□□ -2.24
Q6P435 RNU7-95P-201ENST00000459222 64 ntBASIC1.03□□□□□ -2.24
Q6P435 Y_RNA.638-201ENST00000459374 113 ntBASIC1.03□□□□□ -2.24
Q6P435 AC108210.2-201ENST00000503681 201 ntBASIC1.03□□□□□ -2.24
Q6P435 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.03□□□□□ -2.24
Q6P435 Y_RNA.679-201ENST00000516416 91 ntBASIC1.03□□□□□ -2.24
Q6P435 RNU6-1271P-201ENST00000517049 105 ntBASIC1.03□□□□□ -2.24
Q6P435 AC006006.1-201ENST00000603082 144 ntBASIC1.03□□□□□ -2.24
Q6P435 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.03□□□□□ -2.24
Q6P435 AL442067.1-201ENST00000613261 223 ntBASIC1.03□□□□□ -2.24
Q6P435 AC073349.3-201ENST00000617616 186 ntBASIC1.03□□□□□ -2.24
Q6P435 MIRLET7C-201ENST00000362160 84 ntBASIC1.02□□□□□ -2.25
Q6P435 RNU6-1209P-201ENST00000363655 107 ntBASIC1.02□□□□□ -2.25
Q6P435 Y_RNA.796-201ENST00000364268 102 ntBASIC1.02□□□□□ -2.25
Q6P435 Y_RNA.292-201ENST00000364904 97 ntBASIC1.02□□□□□ -2.25
Q6P435 Y_RNA.799-201ENST00000364992 102 ntBASIC1.02□□□□□ -2.25
Q6P435 MIR194-1-201ENST00000384892 85 ntBASIC1.02□□□□□ -2.25
Q6P435 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Q6P435 RNA5SP482-201ENST00000391269 118 ntBASIC1.02□□□□□ -2.25
Q6P435 AL161935.2-201ENST00000414627 60 ntBASIC1.02□□□□□ -2.25
Q6P435 CALM2P4-201ENST00000430810 426 ntBASIC1.02□□□□□ -2.25
Q6P435 HMGN1P7-201ENST00000491722 313 ntBASIC1.02□□□□□ -2.25
Q6P435 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.02□□□□□ -2.25
Q6P435 RNU7-28P-201ENST00000516759 62 ntBASIC1.02□□□□□ -2.25
Q6P435 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.02□□□□□ -2.25
Q6P435 SNORA77B-201ENST00000578179 125 ntBASIC1.02□□□□□ -2.25
Q6P435 SNORA28-201ENST00000606769 126 ntBASIC1.02□□□□□ -2.25
Q6P435 AL353997.5-201ENST00000618886 171 ntBASIC1.02□□□□□ -2.25
Q6P435 AL365265.1-201ENST00000621045 234 ntBASIC1.02□□□□□ -2.25
Q6P435 SNORD68-201ENST00000363214 84 ntBASIC1.01□□□□□ -2.25
Q6P435 RNU6-414P-201ENST00000363705 104 ntBASIC1.01□□□□□ -2.25
Q6P435 SNORA7.1-201ENST00000363750 139 ntBASIC1.01□□□□□ -2.25
Q6P435 Y_RNA.304-201ENST00000365011 112 ntBASIC1.01□□□□□ -2.25
Q6P435 RNY4P28-201ENST00000365281 93 ntBASIC1.01□□□□□ -2.25
Q6P435 RNU6-969P-201ENST00000383900 105 ntBASIC1.01□□□□□ -2.25
Q6P435 RNU6-424P-201ENST00000384367 105 ntBASIC1.01□□□□□ -2.25
Q6P435 Y_RNA.489-201ENST00000384410 101 ntBASIC1.01□□□□□ -2.25
Q6P435 MIR522-201ENST00000385071 87 ntBASIC1.01□□□□□ -2.25
Q6P435 U8.16-201ENST00000391279 133 ntBASIC1.01□□□□□ -2.25
Q6P435 MLLT10P1-201ENST00000418346 262 ntBASIC1.01□□□□□ -2.25
Q6P435 AC108667.1-201ENST00000428618 249 ntBASIC1.01□□□□□ -2.25
Q6P435 SNRPGP10-201ENST00000432323 225 ntBASIC1.01□□□□□ -2.25
Q6P435 JTBP1-201ENST00000441314 247 ntBASIC1.01□□□□□ -2.25
Q6P435 RNA5SP168-201ENST00000516642 112 ntBASIC1.01□□□□□ -2.25
Q6P435 RNU6-1116P-201ENST00000517269 99 ntBASIC1.01□□□□□ -2.25
Q6P435 AC100767.1-201ENST00000528178 123 ntBASIC1.01□□□□□ -2.25
Q6P435 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.01□□□□□ -2.25
Q6P435 MIR4762-201ENST00000585261 75 ntBASIC1.01□□□□□ -2.25
Q6P435 MIR8074-201ENST00000615081 81 ntBASIC1.01□□□□□ -2.25
Q6P435 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Q6P435 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
Q6P435 Y_RNA.24-201ENST00000362508 103 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 298.1 ms