Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 SNORD45.4-201ENST00000516629 73 ntBASIC2.63□□□□□ -1.99
ZNF394Q53GI3 MIR548X2-201ENST00000579776 100 ntBASIC2.63□□□□□ -1.99
ZNF394Q53GI3 MIR4672-201ENST00000583126 81 ntBASIC2.63□□□□□ -1.99
ZNF394Q53GI3 AP001485.1-201ENST00000604799 199 ntBASIC2.63□□□□□ -1.99
ZNF394Q53GI3 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 RNA5SP456-201ENST00000364002 114 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 RNU4-11P-201ENST00000365287 132 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 SNORA80E-201ENST00000384744 137 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 RNU6-360P-201ENST00000390944 104 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 RNA5SP212-201ENST00000391223 107 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 RNU7-34P-201ENST00000459394 64 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 AC006441.5-201ENST00000612680 209 ntBASIC2.62□□□□□ -1.99
ZNF394Q53GI3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF394Q53GI3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF394Q53GI3 RNU6-704P-201ENST00000364162 103 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 SNORA4.2-201ENST00000365313 147 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 RNU6-187P-201ENST00000384139 106 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 RNU6-424P-201ENST00000384367 105 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.61□□□□□ -1.99
ZNF394Q53GI3 RPS12P2-201ENST00000439728 269 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 AC112693.2-201ENST00000556538 232 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 AL513423.1-201ENST00000621695 132 ntBASIC2.61□□□□□ -1.99
ZNF394Q53GI3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
ZNF394Q53GI3 RNU6-888P-201ENST00000363010 101 ntBASIC2.6□□□□□ -1.99
ZNF394Q53GI3 RNU6-163P-201ENST00000384396 106 ntBASIC2.6□□□□□ -1.99
ZNF394Q53GI3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.6□□□□□ -1.99
ZNF394Q53GI3 SNRPGP13-201ENST00000442212 177 ntBASIC2.6□□□□□ -1.99
ZNF394Q53GI3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.6□□□□□ -1.99
ZNF394Q53GI3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.6□□□□□ -1.99
ZNF394Q53GI3 RNU6-346P-201ENST00000516288 111 ntBASIC2.6□□□□□ -1.99
ZNF394Q53GI3 AC090142.3-201ENST00000519012 385 ntBASIC2.6□□□□□ -1.99
ZNF394Q53GI3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.6□□□□□ -1.99
ZNF394Q53GI3 MIR3658-201ENST00000636291 56 ntBASIC2.6□□□□□ -1.99
ZNF394Q53GI3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.6□□□□□ -1.99
ZNF394Q53GI3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF394Q53GI3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF394Q53GI3 MIRLET7C-201ENST00000362160 84 ntBASIC2.59□□□□□ -1.99
ZNF394Q53GI3 RNU6-833P-201ENST00000363486 107 ntBASIC2.59□□□□□ -1.99
ZNF394Q53GI3 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
ZNF394Q53GI3 AL359511.1-201ENST00000402970 211 ntBASIC2.59□□□□□ -1.99
ZNF394Q53GI3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.59□□□□□ -1.99
ZNF394Q53GI3 RNU6-406P-201ENST00000516470 107 ntBASIC2.59□□□□□ -1.99
ZNF394Q53GI3 RNA5SP402-201ENST00000517148 110 ntBASIC2.59□□□□□ -1.99
ZNF394Q53GI3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.59□□□□□ -1.99
ZNF394Q53GI3 AL365205.2-201ENST00000594586 68 ntBASIC2.59□□□□□ -1.99
ZNF394Q53GI3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.59□□□□□ -1.99
ZNF394Q53GI3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
ZNF394Q53GI3 AC080100.1-201ENST00000624239 5356 ntBASIC2.59□□□□□ -2
ZNF394Q53GI3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZNF394Q53GI3 ZNF702P-202ENST00000434269 1966 ntBASIC2.58□□□□□ -2
ZNF394Q53GI3 MIR891A-201ENST00000401237 79 ntBASIC2.58□□□□□ -2
ZNF394Q53GI3 RPL23AP94-201ENST00000512518 302 ntBASIC2.58□□□□□ -2
ZNF394Q53GI3 SNORA31.17-201ENST00000516953 127 ntBASIC2.58□□□□□ -2
ZNF394Q53GI3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZNF394Q53GI3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
ZNF394Q53GI3 MIR569-201ENST00000385228 96 ntBASIC2.57□□□□□ -2
ZNF394Q53GI3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.57□□□□□ -2
ZNF394Q53GI3 PGBD4P5-201ENST00000445958 426 ntBASIC2.57□□□□□ -2
ZNF394Q53GI3 AC114811.1-201ENST00000507207 168 ntBASIC2.57□□□□□ -2
ZNF394Q53GI3 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
ZNF394Q53GI3 RNA5SP168-201ENST00000516642 112 ntBASIC2.57□□□□□ -2
ZNF394Q53GI3 AC046143.2-201ENST00000609789 160 ntBASIC2.57□□□□□ -2
ZNF394Q53GI3 AC021506.2-201ENST00000612354 169 ntBASIC2.57□□□□□ -2
ZNF394Q53GI3 MIR449A-201ENST00000362113 91 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 RNU6-818P-201ENST00000364837 108 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 SNORD38C-201ENST00000384381 69 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 Y_RNA.568-201ENST00000384742 113 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 U8.16-201ENST00000391279 133 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 CALM2P4-201ENST00000430810 426 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 SNRPGP14-201ENST00000435400 219 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 AL513328.1-201ENST00000446460 224 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 RNA5SP57-201ENST00000459463 123 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 AC007751.1-201ENST00000529260 376 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 MIR3910-1-201ENST00000580936 111 ntBASIC2.56□□□□□ -2
ZNF394Q53GI3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
ZNF394Q53GI3 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 RNA5SP289-201ENST00000362332 137 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 RNU6-268P-201ENST00000364174 107 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 SNORD61-201ENST00000384252 73 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 Y_RNA.497-201ENST00000384447 98 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 MIR624-201ENST00000385217 97 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 RNA5SP127-201ENST00000411051 133 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.55□□□□□ -2
ZNF394Q53GI3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.55□□□□□ -2
ZNF394Q53GI3 AC234781.5-201ENST00000508429 271 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ZNF394Q53GI3 RNU6-693P-201ENST00000516134 107 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 Y_RNA.666-201ENST00000516187 112 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 MIR4298-201ENST00000584380 73 ntBASIC2.55□□□□□ -2
ZNF394Q53GI3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
ZNF394Q53GI3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
ZNF394Q53GI3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF394Q53GI3 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
ZNF394Q53GI3 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
ZNF394Q53GI3 MIR660-201ENST00000385235 97 ntBASIC2.54□□□□□ -2
ZNF394Q53GI3 MIR548O-201ENST00000408583 114 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms