Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RNU2-60P-201ENST00000517290 128 ntBASIC2.07□□□□□ -2.08
MMP13P45452 NDUFA5P6-201ENST00000542110 379 ntBASIC2.07□□□□□ -2.08
MMP13P45452 MIR3646-201ENST00000578301 84 ntBASIC2.07□□□□□ -2.08
MMP13P45452 MIR4648-201ENST00000580107 72 ntBASIC2.07□□□□□ -2.08
MMP13P45452 Y_RNA.783-201ENST00000613546 102 ntBASIC2.07□□□□□ -2.08
MMP13P45452 uc_338.4-201ENST00000616635 176 ntBASIC2.07□□□□□ -2.08
MMP13P45452 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.07□□□□□ -2.08
MMP13P45452 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.07□□□□□ -2.08
MMP13P45452 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
MMP13P45452 snoU2-30.2-201ENST00000362805 70 ntBASIC2.06□□□□□ -2.08
MMP13P45452 SNORA16B-201ENST00000364674 135 ntBASIC2.06□□□□□ -2.08
MMP13P45452 RNU6-597P-201ENST00000365620 102 ntBASIC2.06□□□□□ -2.08
MMP13P45452 SNORD116-14-201ENST00000383894 92 ntBASIC2.06□□□□□ -2.08
MMP13P45452 SNORD116-17-201ENST00000383929 92 ntBASIC2.06□□□□□ -2.08
MMP13P45452 SNORD116-15-201ENST00000384445 92 ntBASIC2.06□□□□□ -2.08
MMP13P45452 SNORD20-201ENST00000384550 80 ntBASIC2.06□□□□□ -2.08
MMP13P45452 SNORD116-19-201ENST00000384729 92 ntBASIC2.06□□□□□ -2.08
MMP13P45452 RNU6-1186P-201ENST00000410429 97 ntBASIC2.06□□□□□ -2.08
MMP13P45452 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
MMP13P45452 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
MMP13P45452 RPS27P1-201ENST00000450552 247 ntBASIC2.06□□□□□ -2.08
MMP13P45452 Y_RNA.686-201ENST00000516548 134 ntBASIC2.06□□□□□ -2.08
MMP13P45452 RNU6-1291P-201ENST00000516591 104 ntBASIC2.06□□□□□ -2.08
MMP13P45452 RNU6-1096P-201ENST00000517089 102 ntBASIC2.06□□□□□ -2.08
MMP13P45452 AC007229.1-201ENST00000590455 412 ntBASIC2.06□□□□□ -2.08
MMP13P45452 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.06□□□□□ -2.08
MMP13P45452 AC022202.1-201ENST00000613515 211 ntBASIC2.06□□□□□ -2.08
MMP13P45452 AC022513.1-201ENST00000624512 117 ntBASIC2.06□□□□□ -2.08
MMP13P45452 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
MMP13P45452 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.06□□□□□ -2.08
MMP13P45452 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
MMP13P45452 Y_RNA.634-201ENST00000364811 113 ntBASIC2.05□□□□□ -2.08
MMP13P45452 Y_RNA.432-201ENST00000384087 111 ntBASIC2.05□□□□□ -2.08
MMP13P45452 SNORA75.5-201ENST00000391291 81 ntBASIC2.05□□□□□ -2.08
MMP13P45452 HMGN2P39-201ENST00000398005 273 ntBASIC2.05□□□□□ -2.08
MMP13P45452 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.05□□□□□ -2.08
MMP13P45452 RPS29P21-201ENST00000496272 170 ntBASIC2.05□□□□□ -2.08
MMP13P45452 RNU2-56P-201ENST00000516826 190 ntBASIC2.05□□□□□ -2.08
MMP13P45452 AC026271.5-201ENST00000577873 130 ntBASIC2.05□□□□□ -2.08
MMP13P45452 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.05□□□□□ -2.08
MMP13P45452 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.05□□□□□ -2.08
MMP13P45452 AP001340.1-201ENST00000624405 217 ntBASIC2.05□□□□□ -2.08
MMP13P45452 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
MMP13P45452 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
MMP13P45452 U8.1-201ENST00000362843 134 ntBASIC2.04□□□□□ -2.08
MMP13P45452 Y_RNA.66-201ENST00000362862 102 ntBASIC2.04□□□□□ -2.08
MMP13P45452 Y_RNA.81-201ENST00000362997 102 ntBASIC2.04□□□□□ -2.08
MMP13P45452 RNU6-915P-201ENST00000364943 103 ntBASIC2.04□□□□□ -2.08
MMP13P45452 Y_RNA.486-201ENST00000384398 107 ntBASIC2.04□□□□□ -2.08
MMP13P45452 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
MMP13P45452 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
MMP13P45452 AC008267.6-201ENST00000441664 139 ntBASIC2.04□□□□□ -2.08
MMP13P45452 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
MMP13P45452 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.04□□□□□ -2.08
MMP13P45452 RNU6-659P-201ENST00000516454 104 ntBASIC2.04□□□□□ -2.08
MMP13P45452 RNU7-149P-201ENST00000516739 59 ntBASIC2.04□□□□□ -2.08
MMP13P45452 AC097639.2-201ENST00000603159 172 ntBASIC2.04□□□□□ -2.08
MMP13P45452 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
MMP13P45452 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.03□□□□□ -2.08
MMP13P45452 AC092881.1-201ENST00000638218 2733 ntBASIC2.03□□□□□ -2.08
MMP13P45452 RNU6-215P-201ENST00000365169 102 ntBASIC2.03□□□□□ -2.08
MMP13P45452 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
MMP13P45452 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.03□□□□□ -2.08
MMP13P45452 MIR1253-201ENST00000408273 105 ntBASIC2.03□□□□□ -2.08
MMP13P45452 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.03□□□□□ -2.08
MMP13P45452 AC099677.2-201ENST00000436385 175 ntBASIC2.03□□□□□ -2.08
MMP13P45452 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
MMP13P45452 AL606517.2-201ENST00000442855 241 ntBASIC2.03□□□□□ -2.08
MMP13P45452 RNU1-41P-201ENST00000516161 162 ntBASIC2.03□□□□□ -2.08
MMP13P45452 RNU6-1299P-201ENST00000516316 100 ntBASIC2.03□□□□□ -2.08
MMP13P45452 RNU1-48P-201ENST00000516400 162 ntBASIC2.03□□□□□ -2.08
MMP13P45452 AC007751.1-201ENST00000529260 376 ntBASIC2.03□□□□□ -2.08
MMP13P45452 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
MMP13P45452 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.03□□□□□ -2.08
MMP13P45452 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
MMP13P45452 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
MMP13P45452 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
MMP13P45452 RNU6-1164P-201ENST00000364428 107 ntBASIC2.02□□□□□ -2.09
MMP13P45452 Y_RNA.253-201ENST00000364562 112 ntBASIC2.02□□□□□ -2.09
MMP13P45452 Y_RNA.280-201ENST00000364765 112 ntBASIC2.02□□□□□ -2.09
MMP13P45452 Y_RNA.353-201ENST00000365440 108 ntBASIC2.02□□□□□ -2.09
MMP13P45452 RNU6-80P-201ENST00000384195 107 ntBASIC2.02□□□□□ -2.09
MMP13P45452 SNORD72-201ENST00000390994 80 ntBASIC2.02□□□□□ -2.09
MMP13P45452 RNU2-55P-201ENST00000411146 174 ntBASIC2.02□□□□□ -2.09
MMP13P45452 Y_RNA.629-201ENST00000411368 105 ntBASIC2.02□□□□□ -2.09
MMP13P45452 AL353689.1-201ENST00000438895 199 ntBASIC2.02□□□□□ -2.09
MMP13P45452 RNU7-99P-201ENST00000516271 62 ntBASIC2.02□□□□□ -2.09
MMP13P45452 AP001328.1-201ENST00000528550 176 ntBASIC2.02□□□□□ -2.09
MMP13P45452 AL160236.1-201ENST00000556317 195 ntBASIC2.02□□□□□ -2.09
MMP13P45452 AC011603.4-201ENST00000611325 277 ntBASIC2.02□□□□□ -2.09
MMP13P45452 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
MMP13P45452 AL391516.1-201ENST00000554380 2449 ntBASIC2.02□□□□□ -2.09
MMP13P45452 AP006437.1-201ENST00000641440 3685 ntBASIC2.01□□□□□ -2.09
MMP13P45452 MTND5P32-201ENST00000560711 1802 ntBASIC2.01□□□□□ -2.09
MMP13P45452 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.01□□□□□ -2.09
MMP13P45452 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MMP13P45452 AC008555.8-201ENST00000623602 2168 ntBASIC2.01□□□□□ -2.09
MMP13P45452 RNU6-235P-201ENST00000362644 107 ntBASIC2.01□□□□□ -2.09
MMP13P45452 SNORA12.1-201ENST00000390873 148 ntBASIC2.01□□□□□ -2.09
MMP13P45452 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms