Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC104332.1-201ENST00000440471 797 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 AL606517.2-201ENST00000442855 241 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 HSPE1P13-201ENST00000451143 297 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 SNORD2.1-201ENST00000458762 69 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 Y_RNA.650-201ENST00000459002 102 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 RNU7-141P-201ENST00000459304 62 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 AC117454.1-201ENST00000491120 168 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 RNA5SP445-201ENST00000515889 115 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 Y_RNA.777-201ENST00000516982 102 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 RNU7-172P-201ENST00000517125 64 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.2□□□□□ -2.22
HOXC4P09017 Y_RNA.771-201ENST00000598668 102 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 BX284668.6-201ENST00000606899 438 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 AL353149.1-201ENST00000610667 244 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 AC141273.2-201ENST00000618989 130 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 Y_RNA.789-201ENST00000622480 102 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.2□□□□□ -2.22
HOXC4P09017 AC068647.2-201ENST00000637380 353 ntBASIC1.2□□□□□ -2.22
HOXC4P09017 SNORD114-7-201ENST00000362520 77 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 RNU6-271P-201ENST00000363858 105 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 Y_RNA.274-201ENST00000364714 101 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 RNY4P28-201ENST00000365281 93 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 Y_RNA.456-201ENST00000384232 111 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 RNU6-360P-201ENST00000390944 104 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 Y_RNA.590-201ENST00000410140 107 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 RNU6-710P-201ENST00000410424 105 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 AC024067.1-201ENST00000426199 223 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 JTBP1-201ENST00000441314 247 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 AL163195.1-201ENST00000496941 348 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 SNORA70.12-201ENST00000516084 153 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 AL137100.2-201ENST00000555786 315 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 MIR3684-201ENST00000579779 74 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 AC009779.6-201ENST00000603972 165 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 AL442067.1-201ENST00000613261 223 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 MIR8070-201ENST00000616510 88 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 AC006435.5-201ENST00000624486 112 ntBASIC1.19□□□□□ -2.22
HOXC4P09017 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HOXC4P09017 RNY1-201ENST00000364228 113 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 MIR1298-201ENST00000408783 112 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 Y_RNA.626-201ENST00000411288 95 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 AC245047.4-201ENST00000433189 144 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 AL162725.1-201ENST00000435405 301 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.18□□□□□ -2.22
HOXC4P09017 RPS4XP11-201ENST00000446897 772 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 SUMO1P2-201ENST00000452524 304 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 AC091021.1-201ENST00000468051 388 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.18□□□□□ -2.22
HOXC4P09017 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.18□□□□□ -2.22
HOXC4P09017 RNU6-138P-201ENST00000515952 107 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 Y_RNA.679-201ENST00000516416 91 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 RNU7-115P-201ENST00000516433 55 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 RNU6-902P-201ENST00000517212 91 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 RNU6-794P-201ENST00000517261 64 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 AC024405.2-202ENST00000532731 184 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 SNORA77B-201ENST00000578179 125 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 AP001485.1-201ENST00000604799 199 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 AC013791.1-201ENST00000616619 62 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 AL365265.1-201ENST00000621045 234 ntBASIC1.18□□□□□ -2.22
HOXC4P09017 SNORD33-201ENST00000362761 85 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNU6-653P-201ENST00000363074 106 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNU6-47P-201ENST00000383866 107 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 Y_RNA.552-201ENST00000384665 112 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNA5SP109-201ENST00000391010 116 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNU6-1248P-201ENST00000391096 64 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 MIR1278-201ENST00000408753 81 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNU6-383P-201ENST00000410864 94 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.17□□□□□ -2.22
HOXC4P09017 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 AC015922.2-201ENST00000435593 184 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNU4-71P-201ENST00000516258 113 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNU7-99P-201ENST00000516271 62 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNU6-1146P-201ENST00000516282 102 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 RNA5SP481-201ENST00000516814 122 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 MIR5692C2-201ENST00000577959 77 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 AC091178.2-201ENST00000584401 117 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 AL929325.1-201ENST00000603096 117 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 AC022217.4-201ENST00000604389 163 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 AC005972.2-201ENST00000604690 348 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 AL359075.3-201ENST00000613288 217 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 AL078604.3-201ENST00000615580 211 ntBASIC1.17□□□□□ -2.22
HOXC4P09017 ICE2P2-201ENST00000483823 2787 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
HOXC4P09017 Y_RNA.199-201ENST00000364014 102 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 Y_RNA.200-201ENST00000364018 102 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 RNU6-923P-201ENST00000364753 107 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 Y_RNA.293-201ENST00000364908 93 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 Y_RNA.308-201ENST00000365043 101 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 RNU6-376P-201ENST00000384731 106 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 MT-TR-201ENST00000387439 65 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 RNA5SP323-201ENST00000391094 133 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 MIR1276-201ENST00000408707 83 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 RNU2-7P-201ENST00000410794 178 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.16□□□□□ -2.22
HOXC4P09017 CST2P1-201ENST00000425770 87 ntBASIC1.16□□□□□ -2.22
HOXC4P09017 HSPE1P9-201ENST00000440046 311 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 330.4 ms