Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SYPP08247 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SYPP08247 SNORA22-201ENST00000383907 134 ntBASIC2.65□□□□□ -1.99
SYPP08247 SNORD116-21-201ENST00000384507 92 ntBASIC2.65□□□□□ -1.99
SYPP08247 SNORA67.4-201ENST00000384688 142 ntBASIC2.65□□□□□ -1.99
SYPP08247 RN7SKP192-201ENST00000411291 327 ntBASIC2.65□□□□□ -1.99
SYPP08247 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
SYPP08247 AC104389.3-201ENST00000445629 235 ntBASIC2.65□□□□□ -1.99
SYPP08247 RNU6-1149P-201ENST00000516810 97 ntBASIC2.65□□□□□ -1.99
SYPP08247 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.65□□□□□ -1.99
SYPP08247 AC025166.1-201ENST00000612411 163 ntBASIC2.65□□□□□ -1.99
SYPP08247 AC022513.1-201ENST00000624512 117 ntBASIC2.65□□□□□ -1.99
SYPP08247 MIR376A2-201ENST00000636782 80 ntBASIC2.65□□□□□ -1.99
SYPP08247 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
SYPP08247 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
SYPP08247 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SYPP08247 SNORD68-201ENST00000363214 84 ntBASIC2.64□□□□□ -1.99
SYPP08247 RNU6-23P-201ENST00000363283 107 ntBASIC2.64□□□□□ -1.99
SYPP08247 SNORD56.5-201ENST00000364281 72 ntBASIC2.64□□□□□ -1.99
SYPP08247 Y_RNA.346-201ENST00000365385 112 ntBASIC2.64□□□□□ -1.99
SYPP08247 AL590004.2-201ENST00000404787 371 ntBASIC2.64□□□□□ -1.99
SYPP08247 AC092427.1-202ENST00000430569 476 ntBASIC2.64□□□□□ -1.99
SYPP08247 AL606517.2-201ENST00000442855 241 ntBASIC2.64□□□□□ -1.99
SYPP08247 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.64□□□□□ -1.99
SYPP08247 RN7SL297P-201ENST00000483161 293 ntBASIC2.64□□□□□ -1.99
SYPP08247 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.64□□□□□ -1.99
SYPP08247 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.64□□□□□ -1.99
SYPP08247 AC006441.5-201ENST00000612680 209 ntBASIC2.64□□□□□ -1.99
SYPP08247 AL121890.5-201ENST00000620848 304 ntBASIC2.64□□□□□ -1.99
SYPP08247 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.64□□□□□ -1.99
SYPP08247 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SYPP08247 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.64□□□□□ -1.99
SYPP08247 AC245060.5-201ENST00000610778 3293 ntBASIC2.63□□□□□ -1.99
SYPP08247 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
SYPP08247 Y_RNA.35-201ENST00000362601 101 ntBASIC2.63□□□□□ -1.99
SYPP08247 U8.9-201ENST00000365667 134 ntBASIC2.63□□□□□ -1.99
SYPP08247 SNORD88.1-201ENST00000408684 91 ntBASIC2.63□□□□□ -1.99
SYPP08247 RPS29P6-201ENST00000438196 145 ntBASIC2.63□□□□□ -1.99
SYPP08247 RNU6-113P-201ENST00000516653 101 ntBASIC2.63□□□□□ -1.99
SYPP08247 AC026271.5-201ENST00000577873 130 ntBASIC2.63□□□□□ -1.99
SYPP08247 MIR5197-201ENST00000583721 112 ntBASIC2.63□□□□□ -1.99
SYPP08247 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.63□□□□□ -1.99
SYPP08247 ZNF658B-202ENST00000615961 3375 ntBASIC2.63□□□□□ -1.99
SYPP08247 MTND5P18-201ENST00000445624 1801 ntBASIC2.63□□□□□ -1.99
SYPP08247 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SYPP08247 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SYPP08247 RNU6-442P-201ENST00000383968 104 ntBASIC2.62□□□□□ -1.99
SYPP08247 MIR802-201ENST00000390235 94 ntBASIC2.62□□□□□ -1.99
SYPP08247 MIR548O-201ENST00000408583 114 ntBASIC2.62□□□□□ -1.99
SYPP08247 SNRPGP14-201ENST00000435400 219 ntBASIC2.62□□□□□ -1.99
SYPP08247 Y_RNA.649-201ENST00000459077 103 ntBASIC2.62□□□□□ -1.99
SYPP08247 MIR4524B-201ENST00000581569 115 ntBASIC2.62□□□□□ -1.99
SYPP08247 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.62□□□□□ -1.99
SYPP08247 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
SYPP08247 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.62□□□□□ -1.99
SYPP08247 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SYPP08247 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SYPP08247 SNORD14E-201ENST00000364009 85 ntBASIC2.61□□□□□ -1.99
SYPP08247 RNA5SP482-201ENST00000391269 118 ntBASIC2.61□□□□□ -1.99
SYPP08247 AC245047.3-201ENST00000429428 127 ntBASIC2.61□□□□□ -1.99
SYPP08247 RNA5SP282-201ENST00000516355 108 ntBASIC2.61□□□□□ -1.99
SYPP08247 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SYPP08247 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
SYPP08247 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SYPP08247 MIR3613-201ENST00000579844 87 ntBASIC2.61□□□□□ -1.99
SYPP08247 AC134878.1-201ENST00000619901 243 ntBASIC2.61□□□□□ -1.99
SYPP08247 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
SYPP08247 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
SYPP08247 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.6□□□□□ -1.99
SYPP08247 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
SYPP08247 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SYPP08247 RNU6-268P-201ENST00000364174 107 ntBASIC2.6□□□□□ -1.99
SYPP08247 snoU2-30.1-201ENST00000365012 70 ntBASIC2.6□□□□□ -1.99
SYPP08247 Y_RNA.410-201ENST00000383992 113 ntBASIC2.6□□□□□ -1.99
SYPP08247 RNU6-880P-201ENST00000384526 107 ntBASIC2.6□□□□□ -1.99
SYPP08247 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SYPP08247 SNORA3.2-201ENST00000408221 125 ntBASIC2.6□□□□□ -1.99
SYPP08247 RNA5SP425-201ENST00000410336 112 ntBASIC2.6□□□□□ -1.99
SYPP08247 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
SYPP08247 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.6□□□□□ -1.99
SYPP08247 snoU13.15-201ENST00000459407 104 ntBASIC2.6□□□□□ -1.99
SYPP08247 RNU7-25P-201ENST00000516544 62 ntBASIC2.6□□□□□ -1.99
SYPP08247 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.6□□□□□ -1.99
SYPP08247 AC022202.1-201ENST00000613515 211 ntBASIC2.6□□□□□ -1.99
SYPP08247 U4.3-201ENST00000621047 82 ntBASIC2.6□□□□□ -1.99
SYPP08247 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SYPP08247 RNU1-58P-201ENST00000362413 163 ntBASIC2.59□□□□□ -1.99
SYPP08247 RNU6-1084P-201ENST00000362498 107 ntBASIC2.59□□□□□ -1.99
SYPP08247 SNORD115-3-201ENST00000363100 82 ntBASIC2.59□□□□□ -1.99
SYPP08247 RNU6-147P-201ENST00000383983 107 ntBASIC2.59□□□□□ -1.99
SYPP08247 MIR548A1-201ENST00000385041 97 ntBASIC2.59□□□□□ -1.99
SYPP08247 RNA5SP109-201ENST00000391010 116 ntBASIC2.59□□□□□ -1.99
SYPP08247 MIR1263-201ENST00000408324 86 ntBASIC2.59□□□□□ -1.99
SYPP08247 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.59□□□□□ -1.99
SYPP08247 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.59□□□□□ -1.99
SYPP08247 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.59□□□□□ -1.99
SYPP08247 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.59□□□□□ -1.99
SYPP08247 SNORD45.4-201ENST00000516629 73 ntBASIC2.59□□□□□ -1.99
SYPP08247 RNU7-28P-201ENST00000516759 62 ntBASIC2.59□□□□□ -1.99
SYPP08247 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms