Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 RNU6-290P-201ENST00000365212 101 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 MIR653-201ENST00000385279 96 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 SNORD41-201ENST00000386967 70 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 MIR891A-201ENST00000401237 79 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 SNORA36B-201ENST00000410438 131 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 SNRPGP10-201ENST00000432323 225 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 U8.19-201ENST00000459095 133 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 CYCTP-201ENST00000504253 315 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 RNU6-570P-201ENST00000517051 105 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 RNU6-165P-201ENST00000517170 99 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 MIR4762-201ENST00000585261 75 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 FAM106DP-201ENST00000586416 501 ntBASIC1.32□□□□□ -2.2
TSPAN1O60635 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.32□□□□□ -2.2
TSPAN1O60635 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.31□□□□□ -2.2
TSPAN1O60635 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TSPAN1O60635 RNU6-1084P-201ENST00000362498 107 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 Y_RNA.84-201ENST00000363011 104 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 RNU6-833P-201ENST00000363486 107 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 Y_RNA.226-201ENST00000364337 114 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 SNORD50B-201ENST00000364995 70 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 RNU6-947P-201ENST00000516264 106 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 RNU2-31P-201ENST00000516954 155 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 AC090049.2-201ENST00000550377 109 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 AL513534.2-201ENST00000603836 250 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 AC068700.1-201ENST00000565862 3754 ntBASIC1.31□□□□□ -2.2
TSPAN1O60635 RNU6-1209P-201ENST00000363655 107 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 RNU6-662P-201ENST00000384253 104 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 MIR516B2-201ENST00000385190 85 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 MIR1298-201ENST00000408783 112 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 AL731563.1-201ENST00000442202 214 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 Y_RNA.637-201ENST00000459424 114 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 SCARNA24.2-201ENST00000516968 130 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 AC005357.1-201ENST00000588399 301 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 AL512605.2-201ENST00000592972 256 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 AC027279.3-201ENST00000625055 122 ntBASIC1.3□□□□□ -2.2
TSPAN1O60635 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 RNU6-238P-201ENST00000363313 106 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 Y_RNA.796-201ENST00000364268 102 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 Y_RNA.799-201ENST00000364992 102 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 SNORA2.2-201ENST00000365473 135 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 RNU6-1248P-201ENST00000391096 64 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 RNU6-131P-201ENST00000391144 107 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 RNU6-1109P-201ENST00000391187 107 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.29□□□□□ -2.2
TSPAN1O60635 AC091959.1-201ENST00000495857 238 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 AC090821.2-201ENST00000523552 176 ntBASIC1.29□□□□□ -2.2
TSPAN1O60635 RNU6-1011P-201ENST00000384668 107 ntBASIC1.28□□□□□ -2.2
TSPAN1O60635 MIR606-201ENST00000384851 96 ntBASIC1.28□□□□□ -2.2
TSPAN1O60635 AL451046.2-201ENST00000403074 277 ntBASIC1.28□□□□□ -2.2
TSPAN1O60635 RNU6-437P-201ENST00000459408 95 ntBASIC1.28□□□□□ -2.2
TSPAN1O60635 RNU6-1143P-201ENST00000516125 104 ntBASIC1.28□□□□□ -2.2
TSPAN1O60635 RNU6-635P-201ENST00000516651 102 ntBASIC1.28□□□□□ -2.2
TSPAN1O60635 RNA5SP102-201ENST00000516865 106 ntBASIC1.28□□□□□ -2.2
TSPAN1O60635 GHRLOS.1-201ENST00000610995 70 ntBASIC1.28□□□□□ -2.2
TSPAN1O60635 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TSPAN1O60635 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
TSPAN1O60635 SNORA25.1-201ENST00000362326 128 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 SNORA63-201ENST00000363450 132 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 SNORA63C-201ENST00000364578 129 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 SNORA25.9-201ENST00000365087 128 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 RNU6-326P-201ENST00000365480 107 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 Y_RNA.422-201ENST00000384054 114 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 RNU6-1160P-201ENST00000384546 104 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 RPL30P7-201ENST00000479312 323 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 NDUFA4P2-201ENST00000489989 244 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.27□□□□□ -2.21
TSPAN1O60635 Y_RNA.720-201ENST00000517166 92 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 DEFB108E-201ENST00000524692 240 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 RPL23AP91-201ENST00000569211 455 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 AC006504.6-201ENST00000590142 199 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 Y_RNA.812-201ENST00000610788 101 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 Y_RNA.784-201ENST00000613803 101 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 Y_RNA.787-201ENST00000616522 101 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 Y_RNA.780-201ENST00000617336 101 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 Y_RNA.801-201ENST00000619005 101 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
TSPAN1O60635 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.27□□□□□ -2.21
TSPAN1O60635 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.27□□□□□ -2.21
TSPAN1O60635 snoU2-30.1-201ENST00000365012 70 ntBASIC1.26□□□□□ -2.21
TSPAN1O60635 MIR499A-201ENST00000384903 122 ntBASIC1.26□□□□□ -2.21
TSPAN1O60635 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
TSPAN1O60635 SNORA53-201ENST00000391141 249 ntBASIC1.26□□□□□ -2.21
TSPAN1O60635 RNU6-1203P-201ENST00000410703 110 ntBASIC1.26□□□□□ -2.21
TSPAN1O60635 RNU6-383P-201ENST00000410864 94 ntBASIC1.26□□□□□ -2.21
TSPAN1O60635 RNU6-322P-201ENST00000516010 103 ntBASIC1.26□□□□□ -2.21
TSPAN1O60635 JPX_2.1-201ENST00000614161 69 ntBASIC1.26□□□□□ -2.21
TSPAN1O60635 RNU6-1272P-201ENST00000362776 107 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 RNU6-899P-201ENST00000363947 107 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 Y_RNA.376-201ENST00000365638 108 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 RNU6-969P-201ENST00000383900 105 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 RNU6-514P-201ENST00000384208 107 ntBASIC1.25□□□□□ -2.21
TSPAN1O60635 MIR1287-201ENST00000408492 90 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms