Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LRRC53A6NM62 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LRRC53A6NM62 Y_RNA.117-201ENST00000363294 101 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 Y_RNA.275-201ENST00000364726 110 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 RNU6-969P-201ENST00000383900 105 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 RNU6-1065P-201ENST00000384513 106 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 MIR526A1-201ENST00000384897 85 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 RPL39P38-201ENST00000467018 153 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 SNORD45.4-201ENST00000516629 73 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 RNU6-922P-201ENST00000516753 99 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 JPX_2.1-201ENST00000614161 69 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 AL121890.5-201ENST00000620848 304 ntBASIC1.48□□□□□ -2.17
LRRC53A6NM62 MIR335-201ENST00000362173 94 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 Y_RNA.44-201ENST00000362676 108 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 RNU6-1289P-201ENST00000384431 106 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 MIR653-201ENST00000385279 96 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 RNU6-383P-201ENST00000410864 94 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 MTCYBP9-201ENST00000431021 303 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 NDUFA4P2-201ENST00000489989 244 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 RPL23AP91-201ENST00000569211 455 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 AC104984.5-201ENST00000586878 94 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 U6.104-201ENST00000637979 90 ntBASIC1.47□□□□□ -2.17
LRRC53A6NM62 RNU6-740P-201ENST00000364734 105 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 snoU2-30.1-201ENST00000365012 70 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 RNU6-144P-201ENST00000383951 107 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 RNU6-651P-201ENST00000411040 105 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 RPS29P29-201ENST00000456396 171 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.46□□□□□ -2.18
LRRC53A6NM62 Y_RNA.714-201ENST00000517065 90 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 RNU6-548P-201ENST00000517083 115 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 AL512310.8-201ENST00000550183 120 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 MIR2681-201ENST00000581814 105 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 MIR7843-201ENST00000622274 79 ntBASIC1.46□□□□□ -2.18
LRRC53A6NM62 Y_RNA.293-201ENST00000364908 93 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 SNORA2.2-201ENST00000365473 135 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 RNU6-211P-201ENST00000384047 107 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 Y_RNA.518-201ENST00000384552 113 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 MIR1298-201ENST00000408783 112 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.45□□□□□ -2.18
LRRC53A6NM62 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.45□□□□□ -2.18
LRRC53A6NM62 AC090049.2-201ENST00000550377 109 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.45□□□□□ -2.18
LRRC53A6NM62 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 MIR4303-201ENST00000581299 66 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 FAM106DP-201ENST00000586416 501 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 AL513534.2-201ENST00000603836 250 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 MIR6715A-201ENST00000615929 79 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 U2.14-201ENST00000615943 113 ntBASIC1.45□□□□□ -2.18
LRRC53A6NM62 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LRRC53A6NM62 SNORD41-201ENST00000386967 70 ntBASIC1.44□□□□□ -2.18
LRRC53A6NM62 AL591806.2-201ENST00000433122 173 ntBASIC1.44□□□□□ -2.18
LRRC53A6NM62 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
LRRC53A6NM62 SNORD11-201ENST00000459124 84 ntBASIC1.44□□□□□ -2.18
LRRC53A6NM62 CYP3A52P-201ENST00000563326 91 ntBASIC1.44□□□□□ -2.18
LRRC53A6NM62 AC012433.1-201ENST00000588916 398 ntBASIC1.44□□□□□ -2.18
LRRC53A6NM62 RNU4-10P-201ENST00000364383 140 ntBASIC1.43□□□□□ -2.18
LRRC53A6NM62 MIR516B2-201ENST00000385190 85 ntBASIC1.43□□□□□ -2.18
LRRC53A6NM62 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
LRRC53A6NM62 SNORA67.5-201ENST00000391036 107 ntBASIC1.43□□□□□ -2.18
LRRC53A6NM62 RNU2-38P-201ENST00000410856 79 ntBASIC1.43□□□□□ -2.18
LRRC53A6NM62 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
LRRC53A6NM62 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
LRRC53A6NM62 MIR452-201ENST00000385020 85 ntBASIC1.42□□□□□ -2.18
LRRC53A6NM62 AL451046.2-201ENST00000403074 277 ntBASIC1.42□□□□□ -2.18
LRRC53A6NM62 MTND3P2-201ENST00000438452 342 ntBASIC1.42□□□□□ -2.18
LRRC53A6NM62 RNU1-123P-201ENST00000458950 160 ntBASIC1.42□□□□□ -2.18
LRRC53A6NM62 RNU6-165P-201ENST00000517170 99 ntBASIC1.42□□□□□ -2.18
LRRC53A6NM62 AC090142.3-201ENST00000519012 385 ntBASIC1.42□□□□□ -2.18
LRRC53A6NM62 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LRRC53A6NM62 MIR367-201ENST00000362299 68 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 SNORD14E-201ENST00000364009 85 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 Y_RNA.288-201ENST00000364854 92 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 AL603910.2-201ENST00000407268 136 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRC53A6NM62 HMGN2P32-201ENST00000444648 269 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 snoU13.23-201ENST00000458863 104 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 SNORD127-201ENST00000458892 86 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 RPL30P7-201ENST00000479312 323 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRC53A6NM62 RNU6-322P-201ENST00000516010 103 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRC53A6NM62 MIR4643-201ENST00000577473 78 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 MIR4724-201ENST00000579485 89 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 AC008507.4-201ENST00000585464 127 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 GHRLOS.1-201ENST00000610995 70 ntBASIC1.41□□□□□ -2.18
LRRC53A6NM62 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
LRRC53A6NM62 Y_RNA.336-201ENST00000365307 109 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 Y_RNA.572-201ENST00000384757 98 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 SNORD72-201ENST00000390994 80 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.4□□□□□ -2.19
LRRC53A6NM62 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 SNORD2.1-201ENST00000458762 69 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 AC108210.2-201ENST00000503681 201 ntBASIC1.4□□□□□ -2.19
LRRC53A6NM62 RN7SKP88-201ENST00000516847 250 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms