Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 RNU6-297P-201ENST00000384636 107 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 RNU6-625P-201ENST00000459412 107 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 AP003461.1-201ENST00000528866 78 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 AL158050.2-201ENST00000605336 568 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 AC092807.2-201ENST00000609367 243 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 AC010205.1-201ENST00000616668 449 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 AC099654.12-201ENST00000639868 649 ntBASIC-0.97□□□□□ -2.56
TRAV13-1A0A0B4J241 SNORD115-24-201ENST00000363528 82 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 MIR513B-201ENST00000385136 84 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 AC244250.2-201ENST00000418731 148 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 AC107297.1-201ENST00000459991 176 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-475P-201ENST00000516073 104 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 AC090616.2-202ENST00000584248 222 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 MIR8055-201ENST00000610739 97 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 AC004223.4-201ENST00000612426 332 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 MIR6082-201ENST00000613604 109 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 AL354950.2-201ENST00000617939 290 ntBASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.98□□□□□ -2.57
TRAV13-1A0A0B4J241 MIR655-201ENST00000362159 97 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 SNORA25.7-201ENST00000364375 127 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-291P-201ENST00000384720 107 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 MIR224-201ENST00000384889 81 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 MIR7-2-201ENST00000384970 110 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 USMG5P1-201ENST00000425964 177 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 EIF1P2-201ENST00000428233 350 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 AL009048.1-201ENST00000450437 298 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU7-67P-201ENST00000459003 62 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 SNORD42A-201ENST00000459584 64 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 ACA59.1-201ENST00000515966 143 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 NAMPTP3-201ENST00000569273 224 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 AL590491.3-201ENST00000610731 82 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 AL391099.1-201ENST00000624635 187 ntBASIC-0.99□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.30-201ENST00000362572 97 ntBASIC-1□□□□□ -2.57
TRAV13-1A0A0B4J241 MT-TQ-201ENST00000387372 72 ntBASIC-1□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-248P-201ENST00000410720 107 ntBASIC-1□□□□□ -2.57
TRAV13-1A0A0B4J241 FCF1P9-201ENST00000412546 282 ntBASIC-1□□□□□ -2.57
TRAV13-1A0A0B4J241 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1□□□□□ -2.57
TRAV13-1A0A0B4J241 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-765P-201ENST00000516916 99 ntBASIC-1□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-38P-201ENST00000384085 107 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-913P-201ENST00000390913 95 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 MIR876-201ENST00000401147 81 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-735P-201ENST00000410612 107 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-602P-201ENST00000411155 105 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU7-73P-201ENST00000458743 63 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU2-12P-201ENST00000517216 168 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 AC006441.5-201ENST00000612680 209 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 AL162376.1-201ENST00000624117 175 ntBASIC-1.01□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 SNORA22B-201ENST00000383876 138 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 MTCO3P40-201ENST00000392516 676 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 RNA5SP118-201ENST00000410385 109 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 AL022718.1-201ENST00000412004 84 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 MTATP6P26-201ENST00000445926 662 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-958P-201ENST00000516995 106 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 AC008507.4-201ENST00000585464 127 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 AC109347.2-201ENST00000610220 349 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 JPX_2.1-201ENST00000614161 69 ntBASIC-1.02□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-403P-201ENST00000363163 104 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 RNA5SP205-201ENST00000364653 136 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 SNORA69-201ENST00000383895 132 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-128P-201ENST00000383976 107 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-767P-201ENST00000384132 107 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 SNORD12C-201ENST00000386307 89 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 HMGN1P33-201ENST00000432945 451 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 AC108676.2-201ENST00000605225 163 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 AC092954.2-201ENST00000609103 430 ntBASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.03□□□□□ -2.57
TRAV13-1A0A0B4J241 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.04□□□□□ -2.58
TRAV13-1A0A0B4J241 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.04□□□□□ -2.58
TRAV13-1A0A0B4J241 RNU6-726P-201ENST00000364680 107 ntBASIC-1.04□□□□□ -2.58
TRAV13-1A0A0B4J241 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.04□□□□□ -2.58
TRAV13-1A0A0B4J241 RNU4-66P-201ENST00000365199 138 ntBASIC-1.04□□□□□ -2.58
TRAV13-1A0A0B4J241 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.04□□□□□ -2.58
TRAV13-1A0A0B4J241 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.04□□□□□ -2.58
TRAV13-1A0A0B4J241 RNU6-535P-201ENST00000384722 107 ntBASIC-1.04□□□□□ -2.58
TRAV13-1A0A0B4J241 MIR517A-201ENST00000385001 87 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms