Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 SNORA4.2-201ENST00000365313 147 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-497P-201ENST00000365316 104 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNA5SP467-201ENST00000391274 118 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-938P-201ENST00000411285 103 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 AL445646.1-201ENST00000431784 216 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 AC099677.2-201ENST00000436385 175 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 AL353689.1-201ENST00000438895 199 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 RNA5SP367-201ENST00000516557 118 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 MIR5680-201ENST00000577577 84 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 MIR5195-201ENST00000583555 115 ntBASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.38□□□□□ -1.87
NUCKS1Q9H1E3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 AC091564.4-201ENST00000533934 2194 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 SNORA1B-201ENST00000362535 133 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.244-201ENST00000364484 109 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 SNORA14A-201ENST00000364773 135 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-1276P-201ENST00000365372 104 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-442P-201ENST00000383968 104 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.531-201ENST00000384589 121 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-644P-201ENST00000391155 98 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNA5SP492-201ENST00000411330 114 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RN7SL504P-201ENST00000494496 287 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-991P-201ENST00000516168 107 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 AC002984.1-201ENST00000591692 448 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 YPEL5P2-201ENST00000605553 359 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 U7.3-201ENST00000616123 62 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 U6.108-201ENST00000637764 58 ntBASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.37□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.10-201ENST00000362371 110 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-268P-201ENST00000364174 107 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-242P-201ENST00000384359 107 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 AC004941.2-201ENST00000427009 228 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 SNRPGP14-201ENST00000435400 219 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-162P-201ENST00000516228 103 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-795P-201ENST00000516323 103 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 HSPE1P19-201ENST00000603327 295 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 AC012531.4-201ENST00000616509 177 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 AC087741.2-201ENST00000619415 172 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 AC091932.4-201ENST00000623386 200 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 MIR622-201ENST00000638396 96 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 GABRG2-229ENST00000641017 3628 ntBASIC3.36□□□□□ -1.87
NUCKS1Q9H1E3 SNORD14E-201ENST00000364009 85 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 SNORA38.1-201ENST00000364172 131 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.351-201ENST00000365436 96 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 SNORA9-201ENST00000384215 133 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.507-201ENST00000384500 99 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 AC096949.1-201ENST00000412047 152 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 AL049830.1-201ENST00000468034 425 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 SNORA70.24-201ENST00000517233 118 ntBASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUCKS1Q9H1E3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-170P-201ENST00000362832 104 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RNU4-16P-201ENST00000364737 141 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-787P-201ENST00000384032 107 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR491-201ENST00000384877 84 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 SNORA18.7-201ENST00000516910 131 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 RN7SKP57-201ENST00000517248 293 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 AP002004.2-201ENST00000531656 154 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR4694-201ENST00000578534 80 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR3618-201ENST00000580330 88 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR3200-201ENST00000580767 85 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 MIR1255B1-201ENST00000636325 63 ntBASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUCKS1Q9H1E3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
NUCKS1Q9H1E3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
NUCKS1Q9H1E3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 SNORD68-201ENST00000363214 84 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-675P-201ENST00000384236 104 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 MIR577-201ENST00000385196 96 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 AL451046.2-201ENST00000403074 277 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU7-80P-201ENST00000459562 61 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RN7SL633P-201ENST00000488974 297 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 AC091826.1-201ENST00000514065 313 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-521P-201ENST00000516663 105 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 AP003484.1-201ENST00000530974 250 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 MIR338-201ENST00000636369 67 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 436.3 ms