Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.56□□□□□ -2.66
ABCA3Q99758 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.56□□□□□ -2.66
ABCA3Q99758 MTCYBP36-201ENST00000404146 440 ntBASIC-1.56□□□□□ -2.66
ABCA3Q99758 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.56□□□□□ -2.66
ABCA3Q99758 RPL22P17-201ENST00000438729 315 ntBASIC-1.56□□□□□ -2.66
ABCA3Q99758 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.56□□□□□ -2.66
ABCA3Q99758 MIR4307-201ENST00000582802 84 ntBASIC-1.56□□□□□ -2.66
ABCA3Q99758 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 MRPL42P2-201ENST00000403169 426 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 AL354751.2-201ENST00000415471 210 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 ELOCP4-201ENST00000420090 333 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.57□□□□□ -2.66
ABCA3Q99758 AC018865.2-201ENST00000423631 129 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 AF186996.7-201ENST00000492781 209 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 RNA5SP33-201ENST00000516687 98 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 AC011458.1-201ENST00000604034 617 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 MIR1246-201ENST00000636535 73 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 SNORD115.1-201ENST00000391109 76 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 MTCO3P38-201ENST00000468910 766 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.57□□□□□ -2.66
ABCA3Q99758 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.57□□□□□ -2.66
ABCA3Q99758 RNU2-13P-201ENST00000515909 113 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 AC022784.5-201ENST00000522241 437 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 U6.114-201ENST00000636407 96 ntBASIC-1.57□□□□□ -2.66
ABCA3Q99758 SNORD115-7-201ENST00000365306 82 ntBASIC-1.58□□□□□ -2.66
ABCA3Q99758 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.58□□□□□ -2.66
ABCA3Q99758 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.58□□□□□ -2.66
ABCA3Q99758 RNU2-11P-201ENST00000459191 187 ntBASIC-1.58□□□□□ -2.66
ABCA3Q99758 AP000942.4-201ENST00000604811 241 ntBASIC-1.58□□□□□ -2.66
ABCA3Q99758 SNORD114-7-201ENST00000362520 77 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 RNU4-66P-201ENST00000365199 138 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 RNU6-117P-201ENST00000365415 107 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 RNU6-602P-201ENST00000411155 105 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 AL137792.2-201ENST00000443484 235 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 RNU7-181P-201ENST00000517234 74 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.59□□□□□ -2.66
ABCA3Q99758 MIR5591-201ENST00000578248 65 ntBASIC-1.59□□□□□ -2.66
ABCA3Q99758 RNU6-509P-201ENST00000363519 107 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RNY1P12-201ENST00000364251 105 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RNU6-224P-201ENST00000384055 107 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RNU6-550P-201ENST00000391057 101 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RPL39P25-201ENST00000449384 154 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
ABCA3Q99758 AC091959.1-201ENST00000495857 238 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RNU6-830P-201ENST00000516353 107 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 MIR4770-201ENST00000579149 58 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 MIR3684-201ENST00000579779 74 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RNU6-442P-201ENST00000383968 104 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RNU6-721P-201ENST00000410155 105 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 MTND3P9-201ENST00000429526 346 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.6□□□□□ -2.67
ABCA3Q99758 AC116353.3-201ENST00000511215 249 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 RNU6-612P-201ENST00000516909 102 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 MTND5P34-201ENST00000568888 325 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 uc_338.10-201ENST00000621872 182 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 AC022418.1-201ENST00000624118 445 ntBASIC-1.6□□□□□ -2.67
ABCA3Q99758 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.6□□□□□ -2.67
ABCA3Q99758 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.61□□□□□ -2.67
ABCA3Q99758 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.61□□□□□ -2.67
ABCA3Q99758 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.61□□□□□ -2.67
ABCA3Q99758 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.61□□□□□ -2.67
ABCA3Q99758 SNORD110-201ENST00000408189 75 ntBASIC-1.61□□□□□ -2.67
ABCA3Q99758 SNORA13-201ENST00000458790 133 ntBASIC-1.61□□□□□ -2.67
ABCA3Q99758 AC105417.1-201ENST00000514691 285 ntBASIC-1.61□□□□□ -2.67
ABCA3Q99758 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
ABCA3Q99758 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.62□□□□□ -2.67
ABCA3Q99758 AC073464.1-201ENST00000429823 534 ntBASIC-1.62□□□□□ -2.67
ABCA3Q99758 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.62□□□□□ -2.67
ABCA3Q99758 AC026421.1-201ENST00000519101 163 ntBASIC-1.62□□□□□ -2.67
ABCA3Q99758 AC022616.6-201ENST00000520479 119 ntBASIC-1.62□□□□□ -2.67
ABCA3Q99758 AC023510.2-201ENST00000622162 746 ntBASIC-1.62□□□□□ -2.67
ABCA3Q99758 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.63□□□□□ -2.67
ABCA3Q99758 RNU6-715P-201ENST00000365204 103 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 SNORD70.1-201ENST00000391007 85 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.63□□□□□ -2.67
ABCA3Q99758 USP9YP16-201ENST00000430287 407 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 SNRPGP10-201ENST00000432323 225 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 AC011352.1-201ENST00000512300 793 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 AGGF1P4-201ENST00000568249 801 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 AC019226.2-201ENST00000625973 424 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 U8.6-201ENST00000364939 135 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 RNU6-784P-201ENST00000384330 106 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 RNU4-83P-201ENST00000410863 133 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 U8.19-201ENST00000459095 133 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 U8.22-201ENST00000459141 133 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 AC107027.2-201ENST00000512197 115 ntBASIC-1.63□□□□□ -2.67
ABCA3Q99758 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.64□□□□□ -2.67
ABCA3Q99758 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.64□□□□□ -2.67
ABCA3Q99758 RNA5SP261-201ENST00000410536 106 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms