Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PKP4Q99569 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
PKP4Q99569 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PKP4Q99569 Y_RNA.23-201ENST00000362496 106 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 snoU2-30.2-201ENST00000362805 70 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 snoU2_19.4-201ENST00000364329 80 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 RNU6-312P-201ENST00000364629 107 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 RNU6-969P-201ENST00000383900 105 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 Y_RNA.412-201ENST00000384001 104 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 RNU6-746P-201ENST00000384112 109 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 Y_RNA.441-201ENST00000384123 112 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 MIR616-201ENST00000385293 97 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 AC019129.1-201ENST00000403786 261 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 AC091021.1-201ENST00000468051 388 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 Y_RNA.797-201ENST00000515977 94 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 DEFB122-202ENST00000569013 197 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 MIR4744-201ENST00000581563 82 ntBASIC1.83□□□□□ -2.12
PKP4Q99569 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PKP4Q99569 RNU1-96P-201ENST00000364163 162 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 SNORD114-6-201ENST00000364393 72 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 RNU6-275P-201ENST00000364910 107 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.82□□□□□ -2.12
PKP4Q99569 RNU6-417P-201ENST00000384712 107 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 RNU6-376P-201ENST00000384731 106 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 Y_RNA.572-201ENST00000384757 98 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.82□□□□□ -2.12
PKP4Q99569 RPL23AP54-201ENST00000495129 419 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
PKP4Q99569 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.82□□□□□ -2.12
PKP4Q99569 AC108706.1-201ENST00000611053 297 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 WWP1P1-201ENST00000466609 2769 ntBASIC1.82□□□□□ -2.12
PKP4Q99569 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
PKP4Q99569 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PKP4Q99569 RNU6-674P-201ENST00000363831 107 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 SNORA72-201ENST00000384339 132 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 RNU6-136P-201ENST00000384663 107 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 RNU6-578P-201ENST00000390980 103 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 RNU6-394P-201ENST00000410735 107 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 RNU6-383P-201ENST00000410864 94 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 RNA5SP100-201ENST00000410903 110 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 RNA5SP59-201ENST00000410922 110 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 RNU4-61P-201ENST00000411243 107 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.81□□□□□ -2.12
PKP4Q99569 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.81□□□□□ -2.12
PKP4Q99569 RNU6-437P-201ENST00000459408 95 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 RNU6-1041P-201ENST00000516254 102 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 MIR4524B-201ENST00000581569 115 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 AL353149.1-201ENST00000610667 244 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 AL391903.3-201ENST00000612158 163 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 AC021753.1-201ENST00000635724 168 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 MIR338-201ENST00000636369 67 ntBASIC1.81□□□□□ -2.12
PKP4Q99569 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
PKP4Q99569 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
PKP4Q99569 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PKP4Q99569 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PKP4Q99569 Y_RNA.229-201ENST00000364347 113 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 RNU11-5P-201ENST00000391216 129 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 RNU6-1186P-201ENST00000410429 97 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 RNU6-1135P-201ENST00000411083 103 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 RNU5E-9P-201ENST00000411164 104 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 EBAG9P1-201ENST00000418955 543 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 ATP5J2P3-201ENST00000451550 258 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.8□□□□□ -2.12
PKP4Q99569 snoU13.23-201ENST00000458863 104 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 AC005840.1-201ENST00000498412 377 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 SCARNA8-201ENST00000515924 131 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 Y_RNA.703-201ENST00000516846 111 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.8□□□□□ -2.12
PKP4Q99569 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
PKP4Q99569 MIR3144-201ENST00000579460 79 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 AC104465.1-201ENST00000611365 139 ntBASIC1.8□□□□□ -2.12
PKP4Q99569 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
PKP4Q99569 RNU6-661P-201ENST00000362409 107 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RNU6-774P-201ENST00000363238 107 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 Y_RNA.170-201ENST00000363746 110 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 Y_RNA.357-201ENST00000365487 109 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RNU6-804P-201ENST00000384286 107 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 Y_RNA.506-201ENST00000384494 102 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RNU6-1228P-201ENST00000391014 107 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RPS4XP11-201ENST00000446897 772 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 AL392103.1-201ENST00000447000 198 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.79□□□□□ -2.12
PKP4Q99569 AC245047.8-201ENST00000456455 284 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RNVU1-2-201ENST00000516326 135 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RNU6-1007P-201ENST00000516586 107 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 RNU6-453P-201ENST00000516819 85 ntBASIC1.79□□□□□ -2.12
PKP4Q99569 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms