Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HMGN1P7-201ENST00000491722 313 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 Y_RNA.662-201ENST00000516028 97 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 SNORA31.10-201ENST00000516482 106 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 RNU6-1007P-201ENST00000516586 107 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 SNORA31.15-201ENST00000516771 132 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 Y_RNA.703-201ENST00000516846 111 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 AC007336.1-201ENST00000576365 3828 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 AC046143.2-201ENST00000609789 160 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 AL591926.4-201ENST00000616895 298 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 AC021753.1-201ENST00000635724 168 ntBASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SYNPOQ8N3V7 RNU6-1209P-201ENST00000363655 107 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 Y_RNA.170-201ENST00000363746 110 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 SNORD114-30-201ENST00000364448 72 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 MIR526A2-201ENST00000390198 65 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 SNORA12.1-201ENST00000390873 148 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 RNA5SP212-201ENST00000391223 107 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 AL591806.2-201ENST00000433122 173 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 AC108210.2-201ENST00000503681 201 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 RNU6-789P-201ENST00000517105 102 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 AL358944.1-201ENST00000528537 144 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 MRPS18CP4-201ENST00000535821 231 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 MIR5694-201ENST00000581190 76 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 AL049861.1-201ENST00000603130 150 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 SNORA28-201ENST00000606769 126 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 U2.22-201ENST00000636441 106 ntBASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SYNPOQ8N3V7 RNU6-674P-201ENST00000363831 107 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 MIR17-201ENST00000385012 84 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 AL034345.1-201ENST00000407768 123 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 RNU2-2P-201ENST00000410396 191 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 MIR5007-201ENST00000583098 95 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 RNU2-4P-201ENST00000606190 192 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 AL773524.1-201ENST00000614065 229 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 AC008555.8-201ENST00000623602 2168 ntBASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SYNPOQ8N3V7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.229-201ENST00000364347 113 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 MIR802-201ENST00000390235 94 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 RNU6-131P-201ENST00000391144 107 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.587-201ENST00000391210 103 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 RNA5SP482-201ENST00000391269 118 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 MIR1289-2-201ENST00000408360 111 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 RNU6-394P-201ENST00000410735 107 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 MIR3910-1-201ENST00000580936 111 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 MIR6873-201ENST00000622788 63 ntBASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 RNU6-804P-201ENST00000384286 107 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.571-201ENST00000384753 98 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 MT-TT-201ENST00000387460 66 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 RNU5E-9P-201ENST00000411164 104 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 AC244636.1-201ENST00000421152 228 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 RNU7-28P-201ENST00000516759 62 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 MTND5P41-201ENST00000517498 206 ntBASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.39□□□□□ -2.03
SYNPOQ8N3V7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 snoU2_19.4-201ENST00000364329 80 ntBASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 RNY1P5-201ENST00000383890 115 ntBASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.441-201ENST00000384123 112 ntBASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 RNU6-1135P-201ENST00000411083 103 ntBASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 RNU7-200P-201ENST00000516105 62 ntBASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 RNU6-453P-201ENST00000516819 85 ntBASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 MIR4299-201ENST00000577899 72 ntBASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 MIR3144-201ENST00000579460 79 ntBASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.38□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.7-201ENST00000362352 102 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.182-201ENST00000363880 111 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 SNORA19-201ENST00000384737 128 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.797-201ENST00000515977 94 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 RN7SKP164-201ENST00000516138 266 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 AC104465.1-201ENST00000611365 139 ntBASIC2.37□□□□□ -2.03
SYNPOQ8N3V7 RNU6-414P-201ENST00000363705 104 ntBASIC2.36□□□□□ -2.03
SYNPOQ8N3V7 RNA5SP496-201ENST00000391240 109 ntBASIC2.36□□□□□ -2.03
SYNPOQ8N3V7 RNU6-381P-201ENST00000391259 108 ntBASIC2.36□□□□□ -2.03
SYNPOQ8N3V7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.36□□□□□ -2.03
SYNPOQ8N3V7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SYNPOQ8N3V7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.398-201ENST00000383952 99 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 Y_RNA.412-201ENST00000384001 104 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 RNU6-439P-201ENST00000384188 106 ntBASIC2.35□□□□□ -2.03
SYNPOQ8N3V7 RNU6-163P-201ENST00000384396 106 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms