Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.09
ZNF549Q6P9A3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
ZNF549Q6P9A3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 SNORA33-201ENST00000363664 130 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 RNU4-13P-201ENST00000364019 141 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 RNU6-978P-201ENST00000364371 103 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.251-201ENST00000364551 99 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 SNORA20-201ENST00000384662 132 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 RNU6-417P-201ENST00000384712 107 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 MIR1261-201ENST00000408659 82 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 AC010154.1-201ENST00000425857 269 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 AC112693.2-201ENST00000556538 232 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 AL353149.1-201ENST00000610667 244 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 U4atac.1-201ENST00000618345 95 ntBASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
ZNF549Q6P9A3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1209P-201ENST00000363655 107 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.218-201ENST00000364218 104 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 MIR562-201ENST00000384894 95 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 RNA5SP467-201ENST00000391274 118 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 SRIP3-201ENST00000413200 219 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 RPL30P13-201ENST00000418873 348 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 RPS29P21-201ENST00000496272 170 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 SNORD77.4-201ENST00000516158 81 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 RNU6-479P-201ENST00000516348 105 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 AC011604.1-201ENST00000545978 196 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 AL160236.1-201ENST00000556317 195 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 MIR3646-201ENST00000578301 84 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 AL031274.2-201ENST00000599419 203 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 AL049861.1-201ENST00000603130 150 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 AC073413.2-201ENST00000604332 360 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 AL365222.1-201ENST00000614661 98 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 AC091895.1-201ENST00000624494 256 ntBASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU6-597P-201ENST00000365620 102 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.420-201ENST00000384043 110 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU2-51P-201ENST00000410708 197 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU2-55P-201ENST00000411146 174 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU1-131P-201ENST00000458943 161 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 AC079804.2-201ENST00000490376 200 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU7-99P-201ENST00000516271 62 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU6-197P-201ENST00000516680 100 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 RPL23AP91-201ENST00000569211 455 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 AC097639.2-201ENST00000603159 172 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 AC120024.3-201ENST00000603167 156 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
ZNF549Q6P9A3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1081P-201ENST00000384537 107 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 SNORA22C-201ENST00000384614 134 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 MIR524-201ENST00000385242 87 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 SNORA40-201ENST00000388090 126 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1168P-201ENST00000390831 104 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 MIR513C-201ENST00000401352 84 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 MIR1253-201ENST00000408273 105 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 RNU6-588P-201ENST00000410281 105 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 RNU6-971P-201ENST00000516920 106 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 MIR548AI-201ENST00000579940 88 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 MIR378D2-201ENST00000580636 98 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 AC245884.12-201ENST00000615364 59 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 uc_338.4-201ENST00000616635 176 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 AC022513.1-201ENST00000624512 117 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.93□□□□□ -2.1
ZNF549Q6P9A3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 RNU6-460P-201ENST00000391158 108 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 CYCSP49-201ENST00000420810 319 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 RPS27P1-201ENST00000450552 247 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 YWHAEP4-201ENST00000505390 198 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 MIR3169-201ENST00000578032 83 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 AC007229.1-201ENST00000590455 412 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 MIR203B-201ENST00000636080 86 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 MIR6844-201ENST00000637122 62 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.92□□□□□ -2.1
ZNF549Q6P9A3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ZNF549Q6P9A3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms