Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 RN7SKP200-201ENST00000410564 320 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 AL162725.1-201ENST00000435405 301 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 HSPE1P13-201ENST00000451143 297 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 TRBVB-201ENST00000477100 408 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 RNU6-1143P-201ENST00000516125 104 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 RNU6-1278P-201ENST00000516130 107 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 RNU6-1096P-201ENST00000517089 102 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 MIR8063-201ENST00000621930 81 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 AC091895.1-201ENST00000624494 256 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 AC068647.2-201ENST00000637380 353 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 ICE2P2-201ENST00000483823 2787 ntBASIC1.47□□□□□ -2.17
LYSMD4Q5XG99 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 U8.7-201ENST00000364940 136 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.466-201ENST00000384294 113 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 AL161935.2-201ENST00000414627 60 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 U8.19-201ENST00000459095 133 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 AC117454.1-201ENST00000491120 168 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 RNA5SP102-201ENST00000516865 106 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 MIR4422-201ENST00000581938 83 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 MIR4452-201ENST00000583004 71 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 SNORA4-201ENST00000584302 138 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 MIR6078-201ENST00000611069 100 ntBASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LYSMD4Q5XG99 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.136-201ENST00000363444 102 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.368-201ENST00000365547 113 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 RNU6-1031P-201ENST00000384773 107 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 MIR194-1-201ENST00000384892 85 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 RNU6-651P-201ENST00000411040 105 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 MTCYBP9-201ENST00000431021 303 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 MTND3P2-201ENST00000438452 342 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 AC099513.1-201ENST00000490423 301 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 AC091959.1-201ENST00000495857 238 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 MTCO2P24-201ENST00000515611 426 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 RNU2-31P-201ENST00000516954 155 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 AC021506.2-201ENST00000612354 169 ntBASIC1.45□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.117-201ENST00000363294 101 ntBASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.149-201ENST00000363558 117 ntBASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 SNORD1A-201ENST00000364968 72 ntBASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 RNU6-763P-201ENST00000390865 106 ntBASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.621-201ENST00000411065 96 ntBASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 STAG3L5P-204ENST00000443759 179 ntBASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 AC005972.2-201ENST00000604690 348 ntBASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LYSMD4Q5XG99 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 MIR562-201ENST00000384894 95 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 MTCO2P33-201ENST00000402100 465 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AL034345.1-201ENST00000407768 123 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 MIR1302-6-201ENST00000408466 90 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 RNU6-710P-201ENST00000410424 105 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 RNU2-38P-201ENST00000410856 79 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AC104332.1-201ENST00000440471 797 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.637-201ENST00000459424 114 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 SERF1AP1-201ENST00000514575 187 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 RNU6-970P-201ENST00000516312 107 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 RNU6-341P-201ENST00000516973 96 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AC136628.3-201ENST00000521868 290 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AC024405.2-202ENST00000532731 184 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AC011604.1-201ENST00000545978 196 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 MIR4503-201ENST00000582187 83 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 AL078603.1-201ENST00000603824 313 ntBASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
LYSMD4Q5XG99 MIR302D-201ENST00000362275 68 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 SNORA25.1-201ENST00000362326 128 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 RNU6-1123P-201ENST00000362347 106 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 RNU4-41P-201ENST00000364426 143 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 RNU6-326P-201ENST00000365480 107 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.456-201ENST00000384232 111 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 SNORA53-201ENST00000391141 249 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 MIR1278-201ENST00000408753 81 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 Z98949.2-201ENST00000440996 144 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 RNU7-141P-201ENST00000459304 62 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 RNU6-1116P-201ENST00000517269 99 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 AC012433.1-201ENST00000588916 398 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 AL512605.2-201ENST00000592972 256 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 POLR3GP1-201ENST00000594073 261 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 AL162424.1-201ENST00000602325 221 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 AP001485.1-201ENST00000604799 199 ntBASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.42□□□□□ -2.18
LYSMD4Q5XG99 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms