Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU6-94P-201ENST00000607728 107 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 MIR8057-201ENST00000620957 69 ntBASIC3.47□□□□□ -1.85
RNF20Q5VTR2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF20Q5VTR2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF20Q5VTR2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.47□□□□□ -1.85
RNF20Q5VTR2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF20Q5VTR2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RNF20Q5VTR2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RNF20Q5VTR2 AC096644.4-201ENST00000563417 2912 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 RNU6-349P-201ENST00000362402 107 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 RNU6-862P-201ENST00000362804 105 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 SNORD46.1-201ENST00000364139 104 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 U8.9-201ENST00000365667 134 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 RNU6-1113P-201ENST00000384348 107 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 U8.17-201ENST00000391292 132 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 SRIP3-201ENST00000413200 219 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.46□□□□□ -1.86
RNF20Q5VTR2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.46□□□□□ -1.86
RNF20Q5VTR2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RNF20Q5VTR2 MIR3651-201ENST00000630427 90 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RNF20Q5VTR2 ZNF720P1-201ENST00000562403 1939 ntBASIC3.46□□□□□ -1.86
RNF20Q5VTR2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RNF20Q5VTR2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RNF20Q5VTR2 snoU2-30.1-201ENST00000365012 70 ntBASIC3.45□□□□□ -1.86
RNF20Q5VTR2 MIR512-1-201ENST00000384913 84 ntBASIC3.45□□□□□ -1.86
RNF20Q5VTR2 MIR1289-1-201ENST00000408836 144 ntBASIC3.45□□□□□ -1.86
RNF20Q5VTR2 IGKV3-31-201ENST00000523109 329 ntBASIC3.45□□□□□ -1.86
RNF20Q5VTR2 MIR5195-201ENST00000583555 115 ntBASIC3.45□□□□□ -1.86
RNF20Q5VTR2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RNF20Q5VTR2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.45□□□□□ -1.86
RNF20Q5VTR2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF20Q5VTR2 Y_RNA.99-201ENST00000363138 105 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 MIR590-201ENST00000385008 97 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 MIR1262-201ENST00000408276 93 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 AC104332.2-201ENST00000429959 156 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 AL445646.1-201ENST00000431784 216 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 RNU7-164P-201ENST00000459221 62 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 RN7SL636P-201ENST00000497504 294 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 SNORD45.4-201ENST00000516629 73 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.44□□□□□ -1.86
RNF20Q5VTR2 MIR5009-201ENST00000578736 100 ntBASIC3.44□□□□□ -1.86
RNF20Q5VTR2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF20Q5VTR2 AC073346.2-201ENST00000624724 2058 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RNF20Q5VTR2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF20Q5VTR2 RNU1-133P-201ENST00000364867 167 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 Y_RNA.298-201ENST00000364960 107 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 SNORA70.4-201ENST00000365509 134 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 RNU6-160P-201ENST00000384591 107 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 SNORA19.1-201ENST00000410656 129 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 AC003685.2-201ENST00000422795 395 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 SNRPGP14-201ENST00000435400 219 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 RNU6-970P-201ENST00000516312 107 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 SNORA18.7-201ENST00000516910 131 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 AC068339.1-201ENST00000526965 141 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 MIR4762-201ENST00000585261 75 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RNF20Q5VTR2 CTSLP2-204ENST00000629029 392 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 AL596211.1-201ENST00000569873 2277 ntBASIC3.43□□□□□ -1.86
RNF20Q5VTR2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
RNF20Q5VTR2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF20Q5VTR2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNF20Q5VTR2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
RNF20Q5VTR2 RNU6-461P-201ENST00000364195 107 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 RNY1P6-201ENST00000384193 109 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 Y_RNA.544-201ENST00000384650 113 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 RNU6-1104P-201ENST00000384723 104 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 MIR515-2-201ENST00000384883 83 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 MIR515-1-201ENST00000384884 83 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 SNORA26.7-201ENST00000391288 122 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 CST2P1-201ENST00000425770 87 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 AC107083.1-201ENST00000439643 279 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF20Q5VTR2 RNU1-131P-201ENST00000458943 161 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 RNA5SP341-201ENST00000516261 117 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 RNU6-844P-201ENST00000517175 102 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 RN7SKP57-201ENST00000517248 293 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 AC024995.1-201ENST00000523014 93 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 AC022523.2-201ENST00000561045 150 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF20Q5VTR2 AC015726.2-201ENST00000620112 122 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.42□□□□□ -1.86
RNF20Q5VTR2 MIR6733-201ENST00000635723 61 ntBASIC3.42□□□□□ -1.86
RNF20Q5VTR2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF20Q5VTR2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF20Q5VTR2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RNF20Q5VTR2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNF20Q5VTR2 Y_RNA.344-201ENST00000365381 112 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 Y_RNA.351-201ENST00000365436 96 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 MIR488-201ENST00000365739 83 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 Y_RNA.440-201ENST00000384120 114 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 SNORA80E-201ENST00000384744 137 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 RNU6-938P-201ENST00000411285 103 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 AL606517.2-201ENST00000442855 241 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 AC091826.1-201ENST00000514065 313 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 RNU6-762P-201ENST00000517107 102 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 AP003484.1-201ENST00000530974 250 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 AC074050.1-201ENST00000563247 211 ntBASIC3.41□□□□□ -1.86
RNF20Q5VTR2 AL162274.2-201ENST00000614406 332 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 1081.2 ms