Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RNU7-172P-201ENST00000517125 64 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 MIR4473-201ENST00000583731 91 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AC125232.2-201ENST00000592457 143 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AC022306.2-201ENST00000617563 647 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 U6.73-201ENST00000619194 103 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 SNORA25.7-201ENST00000364375 127 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 MIR215-201ENST00000384858 110 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 MIR15B-201ENST00000385045 98 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 SNORD64-201ENST00000386683 67 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 U8.15-201ENST00000390947 134 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
ABCA4P78363 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.35□□□□□ -2.47
ABCA4P78363 UQCRBP2-201ENST00000447827 297 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 SUMO1P2-201ENST00000452524 304 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU7-43P-201ENST00000516554 64 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AP001328.1-201ENST00000528550 176 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AC093023.1-201ENST00000547375 507 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 MIR3115-201ENST00000577915 68 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 MIR548AR-201ENST00000582191 57 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AC087752.4-201ENST00000605911 462 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 AC005828.6-201ENST00000606610 232 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.35□□□□□ -2.47
ABCA4P78363 RNU6-502P-201ENST00000362419 108 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-509P-201ENST00000363519 107 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 SNORD115-23-201ENST00000364461 82 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 SNORD115-35-201ENST00000365122 82 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 MIR548A2-201ENST00000384956 97 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 MIR644A-201ENST00000385262 94 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-159P-201ENST00000391080 106 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.36□□□□□ -2.47
ABCA4P78363 MTND3P9-201ENST00000429526 346 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 SNRPGP10-201ENST00000432323 225 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC108059.2-201ENST00000434626 151 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC084290.1-201ENST00000434995 374 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC079781.2-201ENST00000446424 169 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 MTCO2P29-201ENST00000465212 189 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RPL30P10-201ENST00000488148 337 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-881P-201ENST00000516813 102 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 MIR4520-1-201ENST00000582609 70 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 YWHAEP3-201ENST00000582767 121 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC008507.2-201ENST00000588402 1176 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC073648.5-201ENST00000603502 305 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.36□□□□□ -2.47
ABCA4P78363 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.36□□□□□ -2.47
ABCA4P78363 U6.114-201ENST00000636407 96 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC099654.12-201ENST00000639868 649 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 MIR655-201ENST00000362159 97 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 SNORD114-25-201ENST00000363742 72 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-449P-201ENST00000383914 107 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-413P-201ENST00000384115 107 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-24P-201ENST00000384440 107 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-393P-201ENST00000384475 107 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-541P-201ENST00000384709 110 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 MIR125B2-201ENST00000385128 89 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 SNORD72-201ENST00000390994 80 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 MIR889-201ENST00000401280 79 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU2-29P-201ENST00000410423 189 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-705P-201ENST00000410601 104 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC074085.1-201ENST00000413598 418 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RPL30P16-201ENST00000419341 429 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 USMG5P1-201ENST00000425964 177 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-412P-201ENST00000516434 106 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-966P-201ENST00000516479 104 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU6-63P-201ENST00000516690 95 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNU1-54P-201ENST00000517181 120 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 RNA5SP47-201ENST00000517230 109 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC022616.6-201ENST00000520479 119 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 MIR4280-201ENST00000582178 76 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.36□□□□□ -2.47
ABCA4P78363 AL512506.1-201ENST00000613918 449 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 AC099654.13-201ENST00000639774 207 ntBASIC-0.36□□□□□ -2.47
ABCA4P78363 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 RNU6-407P-201ENST00000365280 104 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 SNORA1-201ENST00000384107 130 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 MRPL42P2-201ENST00000403169 426 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 ELOCP20-201ENST00000422460 345 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 Z82188.1-201ENST00000436709 154 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.37□□□□□ -2.47
ABCA4P78363 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.37□□□□□ -2.47
ABCA4P78363 AC021146.9-201ENST00000512503 156 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 RNU7-149P-201ENST00000516739 59 ntBASIC-0.37□□□□□ -2.47
ABCA4P78363 RNU6-158P-201ENST00000517104 100 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms