Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Y_RNA.554-201ENST00000384672 102 ntBASIC0.29□□□□□ -2.36
RFC3P40938 SNORD116-6-201ENST00000384711 96 ntBASIC0.29□□□□□ -2.36
RFC3P40938 RNU2-54P-201ENST00000410299 190 ntBASIC0.29□□□□□ -2.36
RFC3P40938 SNRPGP10-201ENST00000432323 225 ntBASIC0.29□□□□□ -2.36
RFC3P40938 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.29□□□□□ -2.36
RFC3P40938 CHEK2P4-201ENST00000450340 246 ntBASIC0.29□□□□□ -2.36
RFC3P40938 AC011352.1-201ENST00000512300 793 ntBASIC0.29□□□□□ -2.36
RFC3P40938 AL355375.2-201ENST00000574825 175 ntBASIC0.29□□□□□ -2.36
RFC3P40938 MIR548AR-201ENST00000582191 57 ntBASIC0.29□□□□□ -2.36
RFC3P40938 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.29□□□□□ -2.36
RFC3P40938 AC240442.1-201ENST00000616055 283 ntBASIC0.29□□□□□ -2.36
RFC3P40938 AC092794.2-201ENST00000620933 563 ntBASIC0.29□□□□□ -2.36
RFC3P40938 Y_RNA.101-201ENST00000363154 102 ntBASIC0.28□□□□□ -2.36
RFC3P40938 Y_RNA.368-201ENST00000365547 113 ntBASIC0.28□□□□□ -2.36
RFC3P40938 MIR573-201ENST00000384964 99 ntBASIC0.28□□□□□ -2.36
RFC3P40938 SNORD28B-201ENST00000390993 75 ntBASIC0.28□□□□□ -2.36
RFC3P40938 RNA5SP95-201ENST00000410319 137 ntBASIC0.28□□□□□ -2.36
RFC3P40938 RPL17P19-201ENST00000489069 552 ntBASIC0.28□□□□□ -2.36
RFC3P40938 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
RFC3P40938 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
RFC3P40938 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.28□□□□□ -2.36
RFC3P40938 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
RFC3P40938 MIR924-201ENST00000638017 53 ntBASIC0.28□□□□□ -2.36
RFC3P40938 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
RFC3P40938 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
RFC3P40938 Y_RNA.115-201ENST00000363272 98 ntBASIC0.27□□□□□ -2.37
RFC3P40938 Y_RNA.148-201ENST00000363557 117 ntBASIC0.27□□□□□ -2.37
RFC3P40938 RNU6-601P-201ENST00000384540 107 ntBASIC0.27□□□□□ -2.37
RFC3P40938 MIR548F5-201ENST00000408421 86 ntBASIC0.27□□□□□ -2.37
RFC3P40938 MIR1197-201ENST00000408818 88 ntBASIC0.27□□□□□ -2.37
RFC3P40938 MTND4P28-201ENST00000426217 387 ntBASIC0.27□□□□□ -2.37
RFC3P40938 RPS3AP52-201ENST00000435639 297 ntBASIC0.27□□□□□ -2.37
RFC3P40938 RPL7P42-201ENST00000481005 679 ntBASIC0.27□□□□□ -2.37
RFC3P40938 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.27□□□□□ -2.37
RFC3P40938 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
RFC3P40938 RNU6-1012P-201ENST00000516606 109 ntBASIC0.27□□□□□ -2.37
RFC3P40938 RNU6-307P-201ENST00000516743 106 ntBASIC0.27□□□□□ -2.37
RFC3P40938 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.27□□□□□ -2.37
RFC3P40938 MIR1244-1-201ENST00000612829 85 ntBASIC0.27□□□□□ -2.37
RFC3P40938 AC048344.4-201ENST00000619744 527 ntBASIC0.27□□□□□ -2.37
RFC3P40938 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.27□□□□□ -2.37
RFC3P40938 MIR1244-3-201ENST00000635744 85 ntBASIC0.27□□□□□ -2.37
RFC3P40938 MIR1244-2-201ENST00000636449 85 ntBASIC0.27□□□□□ -2.37
RFC3P40938 MIR1244-4-202ENST00000636813 85 ntBASIC0.27□□□□□ -2.37
RFC3P40938 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.27□□□□□ -2.37
RFC3P40938 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
RFC3P40938 RNU6-369P-201ENST00000362515 102 ntBASIC0.26□□□□□ -2.37
RFC3P40938 RNU4-24P-201ENST00000364565 139 ntBASIC0.26□□□□□ -2.37
RFC3P40938 RNU4-75P-201ENST00000364621 146 ntBASIC0.26□□□□□ -2.37
RFC3P40938 RNU6-396P-201ENST00000365369 105 ntBASIC0.26□□□□□ -2.37
RFC3P40938 Y_RNA.482-201ENST00000384377 111 ntBASIC0.26□□□□□ -2.37
RFC3P40938 SNORD38C-201ENST00000384381 69 ntBASIC0.26□□□□□ -2.37
RFC3P40938 RNU6-510P-201ENST00000391239 108 ntBASIC0.26□□□□□ -2.37
RFC3P40938 MTND3P10-201ENST00000450967 341 ntBASIC0.26□□□□□ -2.37
RFC3P40938 MIR2053-201ENST00000459295 91 ntBASIC0.26□□□□□ -2.37
RFC3P40938 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.26□□□□□ -2.37
RFC3P40938 AC060780.3-201ENST00000589464 80 ntBASIC0.26□□□□□ -2.37
RFC3P40938 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
RFC3P40938 SNORD14E-201ENST00000364009 85 ntBASIC0.25□□□□□ -2.37
RFC3P40938 RNU4-45P-201ENST00000365469 141 ntBASIC0.25□□□□□ -2.37
RFC3P40938 Y_RNA.404-201ENST00000383978 102 ntBASIC0.25□□□□□ -2.37
RFC3P40938 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.25□□□□□ -2.37
RFC3P40938 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.25□□□□□ -2.37
RFC3P40938 RNU6-436P-201ENST00000516171 114 ntBASIC0.25□□□□□ -2.37
RFC3P40938 RNU6-830P-201ENST00000516353 107 ntBASIC0.25□□□□□ -2.37
RFC3P40938 RBM11P1-201ENST00000604951 799 ntBASIC0.25□□□□□ -2.37
RFC3P40938 AC015726.2-201ENST00000620112 122 ntBASIC0.25□□□□□ -2.37
RFC3P40938 MIR377-201ENST00000362145 69 ntBASIC0.24□□□□□ -2.37
RFC3P40938 MIR330-201ENST00000362196 94 ntBASIC0.24□□□□□ -2.37
RFC3P40938 RNU6-580P-201ENST00000365159 107 ntBASIC0.24□□□□□ -2.37
RFC3P40938 Y_RNA.339-201ENST00000365325 102 ntBASIC0.24□□□□□ -2.37
RFC3P40938 Y_RNA.376-201ENST00000365638 108 ntBASIC0.24□□□□□ -2.37
RFC3P40938 MT-TN-201ENST00000387400 73 ntBASIC0.24□□□□□ -2.37
RFC3P40938 RNU6-1199P-201ENST00000411249 104 ntBASIC0.24□□□□□ -2.37
RFC3P40938 FCF1P4-201ENST00000448326 183 ntBASIC0.24□□□□□ -2.37
RFC3P40938 AC107399.1-201ENST00000451226 265 ntBASIC0.24□□□□□ -2.37
RFC3P40938 AC087685.1-201ENST00000587507 141 ntBASIC0.24□□□□□ -2.37
RFC3P40938 AC012433.1-201ENST00000588916 398 ntBASIC0.24□□□□□ -2.37
RFC3P40938 AC005176.2-201ENST00000596933 147 ntBASIC0.24□□□□□ -2.37
RFC3P40938 PISRT1.1-201ENST00000616930 107 ntBASIC0.24□□□□□ -2.37
RFC3P40938 U4.5-201ENST00000617137 123 ntBASIC0.24□□□□□ -2.37
RFC3P40938 RNU6-324P-201ENST00000363957 106 ntBASIC0.23□□□□□ -2.37
RFC3P40938 RNU6-99P-201ENST00000364721 107 ntBASIC0.23□□□□□ -2.37
RFC3P40938 RNU6-926P-201ENST00000384075 107 ntBASIC0.23□□□□□ -2.37
RFC3P40938 MIR625-201ENST00000385047 85 ntBASIC0.23□□□□□ -2.37
RFC3P40938 SNORA69.1-201ENST00000390904 137 ntBASIC0.23□□□□□ -2.37
RFC3P40938 RNU6-192P-201ENST00000391253 100 ntBASIC0.23□□□□□ -2.37
RFC3P40938 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.23□□□□□ -2.37
RFC3P40938 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.23□□□□□ -2.37
RFC3P40938 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
RFC3P40938 MIR18A-201ENST00000362310 71 ntBASIC0.22□□□□□ -2.37
RFC3P40938 Y_RNA.30-201ENST00000362572 97 ntBASIC0.22□□□□□ -2.37
RFC3P40938 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
RFC3P40938 RNU6-1323P-201ENST00000384025 107 ntBASIC0.22□□□□□ -2.37
RFC3P40938 Y_RNA.446-201ENST00000384178 104 ntBASIC0.22□□□□□ -2.37
RFC3P40938 Y_RNA.453-201ENST00000384223 109 ntBASIC0.22□□□□□ -2.37
RFC3P40938 MIR520H-201ENST00000385126 88 ntBASIC0.22□□□□□ -2.37
RFC3P40938 Y_RNA.592-201ENST00000410274 109 ntBASIC0.22□□□□□ -2.37
RFC3P40938 MTND3P8-201ENST00000412909 339 ntBASIC0.22□□□□□ -2.37
RFC3P40938 MTCO2P27-201ENST00000420740 428 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms