Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPRAP18433 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPRAP18433 RN7SKP282-201ENST00000516824 299 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.13□□□□□ -1.91
PTPRAP18433 AC087685.1-201ENST00000587507 141 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 AC106754.2-201ENST00000623006 233 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPRAP18433 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPRAP18433 SNORA1B-201ENST00000362535 133 ntBASIC3.12□□□□□ -1.91
PTPRAP18433 Y_RNA.85-201ENST00000363014 111 ntBASIC3.12□□□□□ -1.91
PTPRAP18433 RNU1-142P-201ENST00000516682 145 ntBASIC3.12□□□□□ -1.91
PTPRAP18433 AL358944.1-201ENST00000528537 144 ntBASIC3.12□□□□□ -1.91
PTPRAP18433 SNORD53-201ENST00000579969 78 ntBASIC3.12□□□□□ -1.91
PTPRAP18433 AC064859.1-201ENST00000624741 174 ntBASIC3.12□□□□□ -1.91
PTPRAP18433 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
PTPRAP18433 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.11□□□□□ -1.91
PTPRAP18433 MIR522-201ENST00000385071 87 ntBASIC3.11□□□□□ -1.91
PTPRAP18433 AL117342.1-201ENST00000404861 406 ntBASIC3.11□□□□□ -1.91
PTPRAP18433 COX6CP6-201ENST00000490840 228 ntBASIC3.11□□□□□ -1.91
PTPRAP18433 RNA5SP282-201ENST00000516355 108 ntBASIC3.11□□□□□ -1.91
PTPRAP18433 RNA5SP24-201ENST00000516478 95 ntBASIC3.11□□□□□ -1.91
PTPRAP18433 MIR5197-201ENST00000583721 112 ntBASIC3.11□□□□□ -1.91
PTPRAP18433 AC009831.4-201ENST00000620744 325 ntBASIC3.11□□□□□ -1.91
PTPRAP18433 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.11□□□□□ -1.91
PTPRAP18433 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTPRAP18433 SNORD114-6-201ENST00000364393 72 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 Y_RNA.242-201ENST00000364473 110 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 Y_RNA.369-201ENST00000365568 117 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 MIR561-201ENST00000385216 97 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 RNA5SP323-201ENST00000391094 133 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 FTH1P12-201ENST00000432137 551 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 RN7SL75P-201ENST00000461926 281 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 AL049830.1-201ENST00000468034 425 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 RNU6-240P-201ENST00000516098 97 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 Y_RNA.714-201ENST00000517065 90 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 AL353149.1-201ENST00000610667 244 ntBASIC3.1□□□□□ -1.91
PTPRAP18433 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.1□□□□□ -1.91
PTPRAP18433 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPRAP18433 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPRAP18433 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
PTPRAP18433 SNORA8-201ENST00000384574 139 ntBASIC3.09□□□□□ -1.91
PTPRAP18433 MIR802-201ENST00000390235 94 ntBASIC3.09□□□□□ -1.91
PTPRAP18433 RNU6-220P-201ENST00000390919 107 ntBASIC3.09□□□□□ -1.91
PTPRAP18433 AL590004.2-201ENST00000404787 371 ntBASIC3.09□□□□□ -1.91
PTPRAP18433 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPRAP18433 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.09□□□□□ -1.91
PTPRAP18433 AL035470.1-201ENST00000622571 220 ntBASIC3.09□□□□□ -1.91
PTPRAP18433 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
PTPRAP18433 AC092435.3-201ENST00000565538 3654 ntBASIC3.08□□□□□ -1.92
PTPRAP18433 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PTPRAP18433 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPRAP18433 Y_RNA.163-201ENST00000363702 113 ntBASIC3.08□□□□□ -1.92
PTPRAP18433 RPL21P3-201ENST00000395517 478 ntBASIC3.08□□□□□ -1.92
PTPRAP18433 SNORA3.2-201ENST00000408221 125 ntBASIC3.08□□□□□ -1.92
PTPRAP18433 MIR548O-201ENST00000408583 114 ntBASIC3.08□□□□□ -1.92
PTPRAP18433 RNA5SP380-201ENST00000517190 98 ntBASIC3.08□□□□□ -1.92
PTPRAP18433 AP002004.2-201ENST00000531656 154 ntBASIC3.08□□□□□ -1.92
PTPRAP18433 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPRAP18433 CTSLP2-204ENST00000629029 392 ntBASIC3.08□□□□□ -1.92
PTPRAP18433 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
PTPRAP18433 MAPK10-362ENST00000641864 4484 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 RNU6-766P-201ENST00000362478 107 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 SNORD68-201ENST00000363214 84 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 RNU6-756P-201ENST00000383997 107 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 RNU6-905P-201ENST00000384434 107 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPRAP18433 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.07□□□□□ -1.92
PTPRAP18433 ATP5J2P3-201ENST00000451550 258 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.07□□□□□ -1.92
PTPRAP18433 MIR3605-201ENST00000583214 100 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.07□□□□□ -1.92
PTPRAP18433 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPRAP18433 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTPRAP18433 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTPRAP18433 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PTPRAP18433 SNORA63.5-201ENST00000363548 123 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 Y_RNA.328-201ENST00000365208 113 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 Y_RNA.348-201ENST00000365403 103 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PTPRAP18433 SRIP3-201ENST00000413200 219 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 TRIAP1P1-201ENST00000427062 225 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 RPS29P6-201ENST00000438196 145 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 HMGN2P32-201ENST00000444648 269 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 RPS26P48-201ENST00000491713 339 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 RNA5SP320-201ENST00000516263 124 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 RNU7-25P-201ENST00000516544 62 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 AC134878.1-201ENST00000619901 243 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
PTPRAP18433 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.06□□□□□ -1.92
PTPRAP18433 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPRAP18433 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PTPRAP18433 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPRAP18433 RNA5SP289-201ENST00000362332 137 ntBASIC3.05□□□□□ -1.92
PTPRAP18433 SNORA2.2-201ENST00000365473 135 ntBASIC3.05□□□□□ -1.92
PTPRAP18433 SNORA25B-201ENST00000365507 128 ntBASIC3.05□□□□□ -1.92
PTPRAP18433 RNU6-1189P-201ENST00000383958 107 ntBASIC3.05□□□□□ -1.92
PTPRAP18433 AC003685.2-201ENST00000422795 395 ntBASIC3.05□□□□□ -1.92
PTPRAP18433 AL163195.1-201ENST00000496941 348 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms