Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 Y_RNA.651-201ENST00000459380 103 ntBASIC2.73□□□□□ -1.97
SYPP08247 AC024995.1-201ENST00000523014 93 ntBASIC2.73□□□□□ -1.97
SYPP08247 AL022345.2-201ENST00000606307 135 ntBASIC2.73□□□□□ -1.97
SYPP08247 U4atac.1-201ENST00000618345 95 ntBASIC2.73□□□□□ -1.97
SYPP08247 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SYPP08247 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.73□□□□□ -1.97
SYPP08247 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SYPP08247 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SYPP08247 RNU1-112P-201ENST00000364401 164 ntBASIC2.72□□□□□ -1.97
SYPP08247 RNA5SP323-201ENST00000391094 133 ntBASIC2.72□□□□□ -1.97
SYPP08247 MIR887-201ENST00000401258 79 ntBASIC2.72□□□□□ -1.97
SYPP08247 CST2P1-201ENST00000425770 87 ntBASIC2.72□□□□□ -1.97
SYPP08247 AL445687.1-201ENST00000439946 251 ntBASIC2.72□□□□□ -1.97
SYPP08247 RNU7-94P-201ENST00000459576 63 ntBASIC2.72□□□□□ -1.97
SYPP08247 RNU5E-3P-201ENST00000515913 68 ntBASIC2.72□□□□□ -1.97
SYPP08247 RNA5SP236-201ENST00000516169 116 ntBASIC2.72□□□□□ -1.97
SYPP08247 Y_RNA.666-201ENST00000516187 112 ntBASIC2.72□□□□□ -1.97
SYPP08247 RNU6-1270P-201ENST00000517128 108 ntBASIC2.72□□□□□ -1.97
SYPP08247 AP002004.2-201ENST00000531656 154 ntBASIC2.72□□□□□ -1.97
SYPP08247 AC007536.1-201ENST00000533382 349 ntBASIC2.72□□□□□ -1.97
SYPP08247 AC108081.1-201ENST00000604358 221 ntBASIC2.72□□□□□ -1.97
SYPP08247 AC064859.1-201ENST00000624741 174 ntBASIC2.72□□□□□ -1.97
SYPP08247 MIR548A2-201ENST00000384956 97 ntBASIC2.71□□□□□ -1.98
SYPP08247 MIR522-201ENST00000385071 87 ntBASIC2.71□□□□□ -1.98
SYPP08247 RNA5SP344-201ENST00000411081 104 ntBASIC2.71□□□□□ -1.98
SYPP08247 FTH1P12-201ENST00000432137 551 ntBASIC2.71□□□□□ -1.98
SYPP08247 AF228730.3-201ENST00000436691 102 ntBASIC2.71□□□□□ -1.98
SYPP08247 AL163195.1-201ENST00000496941 348 ntBASIC2.71□□□□□ -1.98
SYPP08247 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.71□□□□□ -1.98
SYPP08247 RNU6-781P-201ENST00000516377 101 ntBASIC2.71□□□□□ -1.98
SYPP08247 RNA5SP24-201ENST00000516478 95 ntBASIC2.71□□□□□ -1.98
SYPP08247 SNORD53-201ENST00000579969 78 ntBASIC2.71□□□□□ -1.98
SYPP08247 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.71□□□□□ -1.98
SYPP08247 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.71□□□□□ -1.98
SYPP08247 MTND5P32-201ENST00000560711 1802 ntBASIC2.7□□□□□ -1.98
SYPP08247 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SYPP08247 RNU6-755P-201ENST00000364400 103 ntBASIC2.7□□□□□ -1.98
SYPP08247 Y_RNA.242-201ENST00000364473 110 ntBASIC2.7□□□□□ -1.98
SYPP08247 MIRLET7F2-201ENST00000385277 83 ntBASIC2.7□□□□□ -1.98
SYPP08247 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.7□□□□□ -1.98
SYPP08247 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
SYPP08247 MTATP6P21-201ENST00000440681 189 ntBASIC2.7□□□□□ -1.98
SYPP08247 AL049830.1-201ENST00000468034 425 ntBASIC2.7□□□□□ -1.98
SYPP08247 RNA5SP148-201ENST00000516527 94 ntBASIC2.7□□□□□ -1.98
SYPP08247 Y_RNA.714-201ENST00000517065 90 ntBASIC2.7□□□□□ -1.98
SYPP08247 AL670379.3-201ENST00000605040 251 ntBASIC2.7□□□□□ -1.98
SYPP08247 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SYPP08247 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
SYPP08247 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SYPP08247 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SYPP08247 RNU6-862P-201ENST00000362804 105 ntBASIC2.69□□□□□ -1.98
SYPP08247 RNA5SP493-201ENST00000364115 91 ntBASIC2.69□□□□□ -1.98
SYPP08247 MIR512-1-201ENST00000384913 84 ntBASIC2.69□□□□□ -1.98
SYPP08247 SNRPGP13-201ENST00000442212 177 ntBASIC2.69□□□□□ -1.98
SYPP08247 Z96811.1-201ENST00000445880 108 ntBASIC2.69□□□□□ -1.98
SYPP08247 RNU6-237P-201ENST00000515985 71 ntBASIC2.69□□□□□ -1.98
SYPP08247 RN7SKP19-201ENST00000516016 252 ntBASIC2.69□□□□□ -1.98
SYPP08247 RNU6-693P-201ENST00000516134 107 ntBASIC2.69□□□□□ -1.98
SYPP08247 MIR3169-201ENST00000578032 83 ntBASIC2.69□□□□□ -1.98
SYPP08247 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
SYPP08247 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SYPP08247 U8.2-201ENST00000363156 134 ntBASIC2.68□□□□□ -1.98
SYPP08247 RNU6-1164P-201ENST00000364428 107 ntBASIC2.68□□□□□ -1.98
SYPP08247 MIR627-201ENST00000384979 97 ntBASIC2.68□□□□□ -1.98
SYPP08247 MIR504-201ENST00000385065 83 ntBASIC2.68□□□□□ -1.98
SYPP08247 SNORD77.3-201ENST00000391113 65 ntBASIC2.68□□□□□ -1.98
SYPP08247 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.68□□□□□ -1.98
SYPP08247 AC099677.2-201ENST00000436385 175 ntBASIC2.68□□□□□ -1.98
SYPP08247 CYCTP-201ENST00000504253 315 ntBASIC2.68□□□□□ -1.98
SYPP08247 RNU1-41P-201ENST00000516161 162 ntBASIC2.68□□□□□ -1.98
SYPP08247 RNU1-48P-201ENST00000516400 162 ntBASIC2.68□□□□□ -1.98
SYPP08247 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.68□□□□□ -1.98
SYPP08247 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
SYPP08247 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.68□□□□□ -1.98
SYPP08247 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
SYPP08247 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SYPP08247 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.67□□□□□ -1.98
SYPP08247 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SYPP08247 AP006437.1-201ENST00000641440 3685 ntBASIC2.67□□□□□ -1.98
SYPP08247 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SYPP08247 MIR26A1-201ENST00000362205 77 ntBASIC2.67□□□□□ -1.98
SYPP08247 MIR518F-201ENST00000384973 87 ntBASIC2.67□□□□□ -1.98
SYPP08247 AC063976.4-201ENST00000421971 163 ntBASIC2.67□□□□□ -1.98
SYPP08247 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.67□□□□□ -1.98
SYPP08247 AL021397.1-201ENST00000451806 248 ntBASIC2.67□□□□□ -1.98
SYPP08247 snoU13.26-201ENST00000459452 105 ntBASIC2.67□□□□□ -1.98
SYPP08247 MIR4762-201ENST00000585261 75 ntBASIC2.67□□□□□ -1.98
SYPP08247 AL449363.1-201ENST00000617815 186 ntBASIC2.67□□□□□ -1.98
SYPP08247 MIR7843-201ENST00000622274 79 ntBASIC2.67□□□□□ -1.98
SYPP08247 CTSLP2-204ENST00000629029 392 ntBASIC2.67□□□□□ -1.98
SYPP08247 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SYPP08247 U8.5-201ENST00000364528 136 ntBASIC2.66□□□□□ -1.98
SYPP08247 MIR548A3-201ENST00000385297 97 ntBASIC2.66□□□□□ -1.98
SYPP08247 UBBP3-201ENST00000445497 241 ntBASIC2.66□□□□□ -1.98
SYPP08247 RN7SL499P-201ENST00000481141 276 ntBASIC2.66□□□□□ -1.98
SYPP08247 SCARNA15-202ENST00000516881 127 ntBASIC2.66□□□□□ -1.98
SYPP08247 IGKV1-22-201ENST00000524313 326 ntBASIC2.66□□□□□ -1.98
SYPP08247 AC022217.4-201ENST00000604389 163 ntBASIC2.66□□□□□ -1.98
SYPP08247 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SYPP08247 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms