Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
ZIC3O60481 SNORA26.9-201ENST00000391322 122 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 RPL23AP6-201ENST00000446637 472 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 COX6CP14-201ENST00000469580 174 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 RPL23AP42-201ENST00000471152 471 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 MRPS17P9-201ENST00000511924 393 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 AC100767.1-201ENST00000528178 123 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 MIR3671-201ENST00000580455 88 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 MIR6845-201ENST00000613182 61 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ZIC3O60481 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
ZIC3O60481 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
ZIC3O60481 RNU6-653P-201ENST00000363074 106 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 Y_RNA.253-201ENST00000364562 112 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 Y_RNA.293-201ENST00000364908 93 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 Y_RNA.552-201ENST00000384665 112 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
ZIC3O60481 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 RNA5SP482-201ENST00000391269 118 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 RN7SKP200-201ENST00000410564 320 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 RNU6-383P-201ENST00000410864 94 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 Y_RNA.626-201ENST00000411288 95 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 COX6CP10-201ENST00000416832 224 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 CYCSP49-201ENST00000420810 319 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 Z98949.2-201ENST00000440996 144 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.66□□□□□ -2.14
ZIC3O60481 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.66□□□□□ -2.14
ZIC3O60481 OR9P1P-201ENST00000496431 281 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.66□□□□□ -2.14
ZIC3O60481 MIR4709-201ENST00000577272 72 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 MIR5688-201ENST00000580619 83 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 MIR4713-201ENST00000582691 75 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 MIR3935-201ENST00000583472 104 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 MIR4769-201ENST00000584126 77 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 AL591926.4-201ENST00000616895 298 ntBASIC1.66□□□□□ -2.14
ZIC3O60481 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
ZIC3O60481 Y_RNA.796-201ENST00000364268 102 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 RNU4-10P-201ENST00000364383 140 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 Y_RNA.265-201ENST00000364677 108 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 Y_RNA.799-201ENST00000364992 102 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 RNU6-969P-201ENST00000383900 105 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 MIR626-201ENST00000385032 94 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 MIR1278-201ENST00000408753 81 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC3O60481 AL591806.2-201ENST00000433122 173 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC3O60481 AC099513.1-201ENST00000490423 301 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 HMGN1P7-201ENST00000491722 313 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
ZIC3O60481 MIR4724-201ENST00000579485 89 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 AL096840.1-201ENST00000603287 93 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 SNORA28-201ENST00000606769 126 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 Y_RNA.802-201ENST00000614892 130 ntBASIC1.65□□□□□ -2.15
ZIC3O60481 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ZIC3O60481 RNU6-1209P-201ENST00000363655 107 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 Y_RNA.262-201ENST00000364641 102 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 RNU6-439P-201ENST00000384188 106 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 SNORA8.3-201ENST00000384679 139 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 Y_RNA.572-201ENST00000384757 98 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 AL034345.1-201ENST00000407768 123 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 MIR1298-201ENST00000408783 112 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 RNU2-40P-201ENST00000410833 196 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.64□□□□□ -2.15
ZIC3O60481 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
ZIC3O60481 AC108210.2-201ENST00000503681 201 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 AC130289.1-201ENST00000577321 73 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 MIR2681-201ENST00000581814 105 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.64□□□□□ -2.15
ZIC3O60481 AC103810.8-201ENST00000607347 118 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 AC021506.2-201ENST00000612354 169 ntBASIC1.64□□□□□ -2.15
ZIC3O60481 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
ZIC3O60481 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
ZIC3O60481 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
ZIC3O60481 MIR367-201ENST00000362299 68 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 RNU6-661P-201ENST00000362409 107 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 Y_RNA.200-201ENST00000364018 102 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 U8.5-201ENST00000364528 136 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 Y_RNA.257-201ENST00000364596 102 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 MIR764-201ENST00000390811 85 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 SUMO2P12-201ENST00000405924 140 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 HMGN2P19-201ENST00000425149 265 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 RNU7-34P-201ENST00000459394 64 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 RNU6-237P-201ENST00000515985 71 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 RNA5SP364-201ENST00000516938 78 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 DEFB122-202ENST00000569013 197 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 MIR4448-201ENST00000584360 86 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 MIR4762-201ENST00000585261 75 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 AL021707.8-201ENST00000609428 183 ntBASIC1.63□□□□□ -2.15
ZIC3O60481 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.63□□□□□ -2.15
ZIC3O60481 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ZIC3O60481 MIRLET7C-201ENST00000362160 84 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 Y_RNA.24-201ENST00000362508 103 ntBASIC1.62□□□□□ -2.15
ZIC3O60481 Y_RNA.199-201ENST00000364014 102 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms