Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC092435.3-201ENST00000565538 3654 ntBASIC3.43□□□□□ -1.86
PCDHB9Q9Y5E1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHB9Q9Y5E1 RNA5SP493-201ENST00000364115 91 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 RNU6-1131P-201ENST00000364955 107 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 Y_RNA.510-201ENST00000384511 114 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 U8.17-201ENST00000391292 132 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 AC104332.2-201ENST00000429959 156 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 AC087499.4-201ENST00000448505 178 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 AL109933.2-201ENST00000452651 260 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 RPL23AP67-201ENST00000465341 474 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 AC021205.2-201ENST00000480069 347 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 RNU6-844P-201ENST00000517175 102 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 AC068339.1-201ENST00000526965 141 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 MIR3169-201ENST00000578032 83 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 U4atac.1-201ENST00000618345 95 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 AC009487.2-201ENST00000420969 6821 ntBASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHB9Q9Y5E1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 Z83843.1-201ENST00000604070 3685 ntBASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 RNU6-440P-201ENST00000390882 105 ntBASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 AC245047.3-201ENST00000429428 127 ntBASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 AL606517.2-201ENST00000442855 241 ntBASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 RNU7-164P-201ENST00000459221 62 ntBASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 RN7SL504P-201ENST00000494496 287 ntBASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 RN7SKP43-201ENST00000516173 320 ntBASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 RNA5SP341-201ENST00000516261 117 ntBASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB9Q9Y5E1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 RNA5SP374-201ENST00000362939 125 ntBASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 Y_RNA.265-201ENST00000364677 108 ntBASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 RNU7-80P-201ENST00000459562 61 ntBASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 RNU7-123P-201ENST00000515911 60 ntBASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 SNORA18.7-201ENST00000516910 131 ntBASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 EIF4BP1-201ENST00000554881 351 ntBASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 AC015726.2-201ENST00000620112 122 ntBASIC3.4□□□□□ -1.87
PCDHB9Q9Y5E1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 Y_RNA.351-201ENST00000365436 96 ntBASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 RNU6-49P-201ENST00000384256 107 ntBASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 MIR548D2-201ENST00000384955 97 ntBASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 MIR3683-201ENST00000580847 82 ntBASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 MIR4305-201ENST00000583252 102 ntBASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 MIR4276-201ENST00000584832 70 ntBASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB9Q9Y5E1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 AL356274.2-201ENST00000624379 3752 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 Y_RNA.78-201ENST00000362970 110 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 Y_RNA.344-201ENST00000365381 112 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 Y_RNA.454-201ENST00000384224 113 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 RNU6-1104P-201ENST00000384723 104 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 MIR590-201ENST00000385008 97 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 S100A11P2-201ENST00000467589 312 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 RNU6-970P-201ENST00000516312 107 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 AC002984.1-201ENST00000591692 448 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 RNVU1-4-201ENST00000612985 164 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 Y_RNA.818-201ENST00000618813 71 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 AC091932.4-201ENST00000623386 200 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 SNORA50A-202ENST00000629536 136 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 AC245060.5-201ENST00000610778 3293 ntBASIC3.38□□□□□ -1.87
PCDHB9Q9Y5E1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 Y_RNA.558-201ENST00000384685 113 ntBASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 AL627390.1-201ENST00000396055 340 ntBASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 AC084364.2-201ENST00000546924 395 ntBASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 MIR5004-201ENST00000579078 107 ntBASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 MIR3163-201ENST00000581592 73 ntBASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB9Q9Y5E1 AC017071.1-201ENST00000564407 2204 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 MIR422A-201ENST00000362286 90 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 RNU6-23P-201ENST00000363283 107 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 RNU6-109P-201ENST00000516364 107 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 RNU6-184P-201ENST00000516514 107 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 RNU6-158P-201ENST00000517104 100 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 AC022523.2-201ENST00000561045 150 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 MIR4778-201ENST00000577635 80 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 AC022513.1-201ENST00000624512 117 ntBASIC3.36□□□□□ -1.87
PCDHB9Q9Y5E1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms