Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 uc_338.25-201ENST00000613756 156 ntBASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.267-201ENST00000364679 109 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR522-201ENST00000385071 87 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 RNU7-25P-201ENST00000516544 62 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.714-201ENST00000517065 90 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR2682-201ENST00000580305 110 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR4305-201ENST00000583252 102 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 AL359075.3-201ENST00000613288 217 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR7112-201ENST00000616126 65 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 AC006111.3-201ENST00000622137 383 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR6079-201ENST00000635807 62 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.37-201ENST00000362606 108 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNU1-105P-201ENST00000363470 161 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNY1P1-201ENST00000364372 112 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNU1-133P-201ENST00000364867 167 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 FTH1P12-201ENST00000432137 551 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNU7-61P-201ENST00000515897 61 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-341P-201ENST00000516973 96 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 AC091544.4-201ENST00000555268 342 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 MAPK10-322ENST00000641485 4530 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC080128.1-201ENST00000474389 1917 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 MIR340-201ENST00000362125 95 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-1099P-201ENST00000363533 107 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 SNORA33-201ENST00000363664 130 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-743P-201ENST00000364151 106 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 MIR802-201ENST00000390235 94 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU11-5P-201ENST00000391216 129 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.601-201ENST00000410500 113 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC123900.1-201ENST00000420390 96 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC009414.1-201ENST00000427200 443 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RPL39P39-201ENST00000455840 151 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU1-131P-201ENST00000458943 161 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RN7SL75P-201ENST00000461926 281 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC093259.1-201ENST00000509755 300 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU2-13P-201ENST00000515909 113 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-65P-201ENST00000516332 98 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU2-35P-201ENST00000516446 142 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 SNORD36C-201ENST00000516733 66 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AL358944.1-201ENST00000528537 144 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC006441.5-201ENST00000612680 209 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC093831.2-201ENST00000624393 3427 ntBASIC3.4□□□□□ -1.86
NUCKS1Q9H1E3 snoU2-30.2-201ENST00000362805 70 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 SNORD115-28-201ENST00000363931 81 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.332-201ENST00000365271 113 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-546P-201ENST00000383991 107 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.440-201ENST00000384120 114 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 RNA5SP274-201ENST00000410484 108 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 RNU7-6P-201ENST00000516845 62 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 AC022254.1-201ENST00000567857 235 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 AL161756.2-201ENST00000604597 246 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.73-201ENST00000362910 113 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.221-201ENST00000364248 96 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.547-201ENST00000384654 119 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 SNORA11.1-201ENST00000408133 129 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 AC113410.1-201ENST00000505029 247 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 MIR3683-201ENST00000580847 82 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 IGLL4P-201ENST00000614590 133 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 MIR3651-201ENST00000630427 90 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 AC073346.2-201ENST00000624724 2058 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms